Immunogenicity 8960
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
NRXN3
Transcript ID
NM_001272020
HLA INFO
B*14:02
TCR INFO
No TCR info found!
Full length protein sequence (637 aa)
MHLRI
1
HARRS
6
PPRRP
11
AWTLG
16
IWFLF
21
WGCIV
26
SSVWS
31
SSNVA
36
SSSST
41
SSSPG
46
SHSQH
51
EHHFH
56
GSKHH
61
SVPIS
66
IYRSP
71
VSLRG
76
GHAGA
81
TYIFG
86
KSGGL
91
ILYTW
96
PANDR
101
PSTRS
106
DRLAV
111
GFSTT
116
VKDGI
121
LVRID
126
SAPGL
131
GDFLQ
136
LHIEQ
141
GKIGV
146
VFNIG
151
TVDIS
156
IKEER
161
TPVND
166
GKYHV
171
VRFTR
176
NGGNA
181
TLQVD
186
NWPVN
191
EHYPT
196
GRQLT
201
IFNTQ
206
AQIAI
211
GGKDK
216
GRLFQ
221
GQLSG
226
LYYDG
231
LKVLN
236
MAAEN
241
NPNIK
246
INGSV
251
RLVGE
256
VPSIL
261
GTTQT
266
TSMPP
271
EMSTT
276
VMETT
281
TTMAT
286
TTTRK
291
NRSTA
296
SIQPT
301
SDDLV
306
SSAEC
311
SSDDE
316
DFVEC
321
EPSTG
326
GELVI
331
PLLVE
336
DPLAT
341
PPIAT
346
RAPSI
351
TLPPT
356
FRPLL
361
TIIET
366
TKDSL
371
SMTSE
376
AGLPC
381
LSDQG
386
SDGCD
391
DDGLV
396
ISGYG
401
SGETF
406
DSNLP
411
PTDDE
416
DFYTT
421
FSLVT
426
DKSLS
431
TSIFE
436
GGYKA
441
HAPKW
446
ESKDF
451
RPNKV
456
SETSR
461
TTTTS
466
LSPEL
471
IRFTA
476
SSSSG
481
MVPKL
486
PAGKM
491
NNRDL
496
KPQPD
501
IVLLP
506
LPTAY
511
ELDST
516
KLKSP
521
LITSP
526
MFRNV
531
PTANP
536
TEPGI
541
RRVPG
546
ASEVI
551
RESSS
556
TTGMV
561
VGIVA
566
AAALC
571
ILILL
576
YAMYK
581
YRNRD
586
EGSYQ
591
VDETR
596
NYISN
601
SAQSN
606
GTLMK
611
EKQQS
616
SKSGH
621
KKQKN
626
KDREY
631
YV
636
Mutation Information
DNA mutation:
None
Peptide Range:
535 ~ 559
Mut AA position:
547 (13 in Wild Type peptide)
Alignment
Wild Type:
"VPTANPTEPGIRRVPGASEVIRESS
||||||||||||.||||||||||||
Mutant:
VPTANPTEPGIRQVPGASEVIRESS"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) NRXN3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay