Immunogenicity 9109

summary
Sample ID
3978
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
BAAT
Transcript ID
NM_001127610
HLA INFO
DQA*03:01 / DQB*03:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*03:01 DQB*03:02
sequence
Full length protein sequence (418 aa)
MIQLT
1
ATPVS
6
ALVDE
11
PVHIR
16
ATGLI
21
PFQMV
26
SFQAS
31
LEDEN
36
GDMFY
41
SQAHY
46
RANEF
51
GEVDL
56
NHASS
61
LGGDY
66
MGVHP
71
MGLFW
76
SLKPE
81
KLLTR
86
LLKRD
91
VMNRP
96
FQVQV
101
KLYDL
106
ELIVN
111
NKVAS
116
APKAS
121
LTLER
126
WYVAP
131
GVTRI
136
KVREG
141
RLRGA
146
LFLPP
151
GEGLF
156
PGVID
161
LFGGL
166
GGLLE
171
FRASL
176
LASRG
181
FASLA
186
LAYHN
191
YEDLP
196
RKPEV
201
TDLEY
206
FEEAA
211
NFLLR
216
HPKVF
221
GSGVG
226
VVSVC
231
QGVQI
236
GLSMA
241
IYLKQ
246
VTATV
251
LINGT
256
NFPFG
261
IPQVY
266
HGQIH
271
QPLPH
276
SAQLI
281
STNAL
286
GLLEL
291
YRTFE
296
TTQVG
301
ASQYL
306
FPIEE
311
AQGQF
316
LFIVG
321
EGDKT
326
INSKA
331
HAEQA
336
IGQLK
341
RHGKN
346
NWTLL
351
SYPGA
356
GHLIE
361
PPYSP
366
LCCAS
371
TTHDL
376
RLHWG
381
GEVIP
386
HAAAQ
391
EHAWK
396
EIQRF
401
LRKHL
406
IPDVT
411
SQL
416
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 25
Mut AA position:
1 (1 in Wild Type peptide)
Alignment
Wild Type:
"MIQLTATPVSALVDEPVHIRATGLI
.||||||||||||||||||||||||
Mutant:
VIQLTATPVSALVDEPVHIRATGLI"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) BAAT

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay