Immunogenicity 9198
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
GPR50
Transcript ID
NM_004224
HLA INFO
B*14:02
TCR INFO
No TCR info found!
Full length protein sequence (617 aa)
MGPTL
1
AVPTP
6
YGCIG
11
CKLPQ
16
PEYPP
21
ALIIF
26
MFCAM
31
VITIV
36
VDLIG
41
NSMVI
46
LAVTK
51
NKKLR
56
NSGNI
61
FVVSL
66
SVADM
71
LVAIY
76
PYPLM
81
LHAMS
86
IGGWD
91
LSQLQ
96
CQMVG
101
FITGL
106
SVVGS
111
IFNIV
116
AIAIN
121
RYCYI
126
CHSLQ
131
YERIF
136
SVRNT
141
CIYLV
146
ITWIM
151
TVLAV
156
LPNMY
161
IGTIE
166
YDPRT
171
YTCIF
176
NYLNN
181
PVFTV
186
TIVCI
191
HFVLP
196
LLIVG
201
FCYVR
206
IWTKV
211
LAARD
216
PAGQN
221
PDNQL
226
AEVRN
231
FLTMF
236
VIFLL
241
FAVCW
246
CPINV
251
LTVLV
256
AVSPK
261
EMAGK
266
IPNWL
271
YLAAY
276
FIAYF
281
NSCLN
286
AVIYG
291
LLNEN
296
FRREY
301
WTIFH
306
AMRHP
311
IIFFS
316
GLISD
321
IREMQ
326
EARTL
331
ARARA
336
HARDQ
341
AREQD
346
RAHAC
351
PAVEE
356
TPMNV
361
RNVPL
366
PGDAA
371
AGHPD
376
RASGH
381
PKPHS
386
RSSSA
391
YRKSA
396
STHHK
401
SVFSH
406
SKAAS
411
GHLKP
416
VSGHS
421
KPASG
426
HPKSA
431
TVYPK
436
PASVH
441
FKADS
446
VHFKG
451
DSVHF
456
KPDSV
461
HFKPA
466
SSNPK
471
PITGH
476
HVSAG
481
SHSKS
486
AFSAA
491
TSHPK
496
PTTGH
501
IKPAT
506
SHAEP
511
TTADY
516
PKPAT
521
TSHPK
526
PTAAD
531
NPELS
536
ASHCP
541
EIPAI
546
AHPVS
551
DDSDL
556
PESAS
561
SPAAG
566
PTKPA
571
ASQLE
576
SDTIA
581
DLPDP
586
TVVTT
591
STNDY
596
HDVVV
601
IDVED
606
DPDEM
611
AV
616
Mutation Information
DNA mutation:
None
Peptide Range:
439 ~ 463
Mut AA position:
451 (13 in Wild Type peptide)
Alignment
Wild Type:
"PKPASVHFKADSVHFKGDSVHFKPD
||||||||||||.||||||||||||
Mutant:
PKPASVHFKADSDHFKGDSVHFKPD"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) GPR50
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay