Immunogenicity 9388
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
PDK3
Transcript ID
NM_005391
HLA INFO
B*18:01
TCR INFO
No TCR info found!
Full length protein sequence (406 aa)
MRLFR
1
WLLKQ
6
PVPKQ
11
IERYS
16
RFSPS
21
PLSIK
26
QFLDF
31
GRDNA
36
CEKTS
41
YMFLR
46
KELPV
51
RLANT
56
MREVN
61
LLPDN
66
LLNRP
71
SVGLV
76
QSWYM
81
QSFLE
86
LLEYE
91
NKSPE
96
DPQVL
101
DNFLQ
106
VLIKV
111
RNRHN
116
DVVPT
121
MAQGV
126
IEYKE
131
KFGFD
136
PFIST
141
NIQYF
146
LDRFY
151
TNRIS
156
FRMLI
161
NQHTL
166
LFGGD
171
TNPVH
176
PKHIG
181
SIDPT
186
CNVAD
191
VVKDA
196
YETAK
201
MLCEQ
206
YYLVA
211
PELEV
216
EEFNA
221
KAPDK
226
PIQVV
231
YVPSH
236
LFHML
241
FELFK
246
NSMRA
251
TVELY
256
EDRKE
261
GYPAV
266
KTLVT
271
LGKED
276
LSIKI
281
SDLGG
286
GVPLR
291
KIDRL
296
FNYMY
301
STAPR
306
PSLEP
311
TRAAP
316
LAGFG
321
YGLPI
326
SRLYA
331
RYFQG
336
DLKLY
341
SMEGV
346
GTDAV
351
IYLKA
356
LSSES
361
FERLP
366
VFNKS
371
AWRHY
376
KTTPE
381
ADDWS
386
NPSSE
391
PRDAS
396
KYKAK
401
Q
406
Mutation Information
DNA mutation:
None
Peptide Range:
71 ~ 95
Mut AA position:
83 (13 in Wild Type peptide)
Alignment
Wild Type:
"LLNRPSVGLVQSWYMQSFLELLEYE
||||||||||||.||||||||||||
Mutant:
LLNRPSVGLVQSCYMQSFLELLEYE"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) PDK3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay