Immunogenicity 9425

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
ST7L
Transcript ID
NM_138729
HLA INFO
DQA*01:02 / DQB*06:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:02
sequence
Full length protein sequence (555 aa)
MADRG
1
GVGEA
6
AAVGA
11
SPASV
16
PGLNP
21
TLGWR
26
ERLRA
31
GLAGT
36
GASLW
41
FVAGL
46
GLLYA
51
LRIPL
56
RLCEN
61
LAAVT
66
VFLNS
71
LTPKF
76
YVALT
81
GTSSL
86
ISGLI
91
FIFEW
96
WYFHK
101
HGTSF
106
IEQVS
111
VSHLQ
116
PLMGG
121
TESSI
126
SEPGS
131
PSRNR
136
ENETS
141
RQNLS
146
ECKVW
151
RNPLN
156
LFRGA
161
EYRRY
166
TWVTG
171
KEPLT
176
YYDMN
181
LSAQD
186
HQTFF
191
TCDTD
196
FLRPS
201
DTVMQ
206
KAWRE
211
RNPPA
216
RIKAA
221
YQALE
226
LNNDC
231
ATAYV
236
LLAEE
241
EATTI
246
VDAER
251
LFKQA
256
LKAGE
261
TIYRQ
266
SQQCQ
271
HQSPQ
276
HEAQL
281
RRDTN
286
VLVYI
291
KRRLA
296
MCARK
301
LGRIR
306
EAVKI
311
MRDLM
316
KEFPP
321
LTMLN
326
IHENL
331
LESLL
336
ELQAY
341
PDVQA
346
VLAKY
351
DDISL
356
PKSAA
361
ICYTA
366
ALLKT
371
RTVSE
376
KFSPE
381
TASRR
386
GLSTA
391
EINAV
396
EAIHR
401
AVEFN
406
PHVPK
411
YLLEM
416
KSLIL
421
PPEHI
426
LKRGD
431
SEAIA
436
YAFFH
441
LQHWK
446
RIEGA
451
LNLLQ
456
CTWEG
461
TFRMI
466
PYPLE
471
KGHLF
476
YPYPS
481
CTETA
486
DRELL
491
PTFHH
496
VSVYP
501
KKELP
506
LFIHF
511
TAGFC
516
SSTAM
521
IAILT
526
HQFPE
531
IMGIF
536
AKAVS
541
MISRT
546
CVDYL
551
Mutation Information
DNA mutation:
None
Peptide Range:
391 ~ 415
Mut AA position:
403 (13 in Wild Type peptide)
Alignment
Wild Type:
"GLSTAEINAVEAIHRAVEFNPHVPK
||||||||||||.||||||||||||
Mutant:
GLSTAEINAVEALHRAVEFNPHVPK"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ST7L

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay