Immunogenicity 9479

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CNRIP1
Transcript ID
NM_015463
HLA INFO
DQA*01:03 / DQB*02:05
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:05
sequence
Full length protein sequence (164 aa)
MGDLP
1
GLVRL
6
SIALR
11
IQPND
16
GPVFY
21
KVDGQ
26
RFGQN
31
RTIKL
36
LTGSS
41
YKVEV
46
KIKPS
51
TLQVE
56
NISIG
61
GVLVP
66
LELKS
71
KEPDG
76
DRVVY
81
TGTYD
86
TEGVT
91
PTKSG
96
ERQPI
101
QITMP
106
FTDIG
111
TFETV
116
WQVKF
121
YNYHK
126
RDHCQ
131
WGSPF
136
SVIEY
141
ECKPN
146
ETRSL
151
MWVNK
156
ESFL
161
Mutation Information
DNA mutation:
None
Peptide Range:
141 ~ 164
Mut AA position:
153 (13 in Wild Type peptide)
Alignment
Wild Type:
"SVIEYECKPNETRSLMWVNKESFL
||||||||||||.|||||||||||
Mutant:
SVIEYECKPNETHSLMWVNKESFL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CNRIP1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay