Immunogenicity 9586

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
FAM227B
Transcript ID
ENST00000561064
HLA INFO
DQA*01:03 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:02
sequence
Full length protein sequence (304 aa)
MAGQR
1
TCQRR
6
SSRAG
11
PGKMQ
16
EPPKS
21
IEEFL
26
KFQNW
31
DYWPR
36
EIHFR
41
DDDKW
46
SCTLK
51
KIKED
56
SSFVS
61
IYTHL
66
WENVP
71
RIFEA
76
LLIME
81
SKLKE
86
YSLIL
91
QNHTS
96
EIFKW
101
KSMIS
106
ETSSY
111
RKLER
116
YGEFL
121
KKYHK
126
KKKIM
131
LSDEM
136
ETEKN
141
IEGCS
146
FTGFK
151
ANELT
156
QLPRH
161
LDAEQ
166
IYLFI
171
LKAHN
176
FDERV
181
FKIWK
186
THFLS
191
EASIA
196
LLHDS
201
FWWWF
206
LHKFR
211
IYPDC
216
LAQAI
221
YATFH
226
EAFPE
231
SSYLF
236
NDEFK
241
EDLGN
246
NIFLW
251
CSGLK
256
PQKGF
261
WIHWK
266
LKELS
271
TTTIH
276
GSKKA
281
PAKSV
286
KERIA
291
DSQEH
296
ISTS
301
Mutation Information
DNA mutation:
None
Peptide Range:
289 ~ 304
Mut AA position:
301 (13 in Wild Type peptide)
Alignment
Wild Type:
"SVKERIADSQEHISTS
||||||||||||.|||
Mutant:
SVKERIADSQEHLSTS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FAM227B

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay