Immunogenicity 9834

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
SLC2A4RG
Transcript ID
ENST00000266077
HLA INFO
B*35:03
TCR INFO

No TCR info found!

T cell Tumor cell B*35:03
sequence
Full length protein sequence (387 aa)
MERPP
1
PRAAG
6
RDPSA
11
LRAEA
16
PWLRA
21
EGPGP
26
RAAPV
31
TVPTP
36
PQGSS
41
VGGGF
46
AGLEF
51
ARPQE
56
SEPRA
61
SDLGA
66
PRTWT
71
GAAAG
76
PRTPS
81
AHIPV
86
PAQRA
91
TPGKA
96
RLDEV
101
MAAAA
106
LTSLS
111
TSPLL
116
LGAPV
121
AAFSP
126
EPGLE
131
PWKEA
136
LVRPP
141
GSYSS
146
SSNSG
151
DWGWD
156
LASDQ
161
SSPST
166
PSPPL
171
PPEAA
176
HFLFG
181
EPTLR
186
KRKSP
191
AQVMF
196
QCLWK
201
SCGKV
206
LSTAS
211
AMQRH
216
IRLVH
221
LGRQA
226
EPEQS
231
DGEED
236
FYYTE
241
LDVGV
246
DTLTD
251
GLSSL
256
TPVSP
261
TASMP
266
PAFPR
271
LELPE
276
LLEPP
281
ALPSP
286
LRPPA
291
PPLPP
296
PPVLS
301
TVANP
306
QSCHS
311
DRVYQ
316
GCLTP
321
ARLEP
326
QPTEV
331
GACPP
336
ALSSR
341
IGVTL
346
RKPRG
351
DAKKC
356
RKVYG
361
MERRD
366
LWCTA
371
CRWKK
376
ACQRF
381
LD
386
Mutation Information
DNA mutation:
None
Peptide Range:
33 ~ 57
Mut AA position:
45 (13 in Wild Type peptide)
Alignment
Wild Type:
"APVTVPTPPQGSSVGGGFAGLEFAR
||||||||||||.||||||||||||
Mutant:
APVTVPTPPQGSFVGGGFAGLEFAR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SLC2A4RG

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay