Immunogenicity 9871

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
IGSF5
Transcript ID
ENST00000380588
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (407 aa)
MGQKE
1
RSTAD
6
TLPDL
11
EEWKS
16
AAGLR
21
WWQTA
26
VVDGS
31
GSGNE
36
VIEGP
41
QNARV
46
LKGSQ
51
ARFNC
56
TVSQG
61
WKLIM
66
WALSD
71
MVVLS
76
VRPME
81
PIITN
86
DRFTS
91
QRYDQ
96
GGNFT
101
SEMII
106
HNVEP
111
SDSGN
116
IRCSL
121
QNSRL
126
HGSAY
131
LTVQV
136
MGELF
141
IPSVN
146
LVVAE
151
NEPCE
156
VTCLP
161
SHWTR
166
LPDIS
171
WELGL
176
LVSHS
181
SYYFV
186
PEPSD
191
LQSAV
196
SILAL
201
TPQSN
206
GTLTC
211
VATWK
216
SLKAR
221
KSATV
226
NLTVI
231
RCPQD
236
TGGGI
241
NIPGV
246
LSSLP
251
SLGFS
256
LPTWG
261
KVGLG
266
LAGTM
271
LLTPT
276
CTLTI
281
RCCCC
286
RRRCC
291
GCNCC
296
CRCCF
301
CCRRK
306
RGFRI
311
QFQKK
316
SEKEK
321
TNKET
326
ETESG
331
NENSG
336
YNSDE
341
QKTTD
346
TASLP
351
PKSCE
356
SSDPE
361
QRNSS
366
CGPPH
371
QRADQ
376
RPPRP
381
ASHPQ
386
ASFNL
391
ASPEK
396
VSNTT
401
VV
406
Mutation Information
DNA mutation:
None
Peptide Range:
315 ~ 339
Mut AA position:
327 (13 in Wild Type peptide)
Alignment
Wild Type:
"IQFQKKSEKEKTNKETETESGNENS
||||||||||||.||||||||||||
Mutant:
IQFQKKSEKEKTSKETETESGNENS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) IGSF5

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay