Immunogenicity 9982

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
CELF4
Transcript ID
ENST00000588591
HLA INFO
DQA*01:03 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:02
sequence
Full length protein sequence (151 aa)
AAAPM
1
TPTSG
6
GSTPP
11
GITAP
16
AVPSI
21
PSPIG
26
VNGFT
31
GLPPQ
36
ANGQP
41
AAEAV
46
FANGI
51
HPYPA
56
QSPTA
61
ADPLQ
66
QAYAG
71
VQQYA
76
GPAAY
81
PAAYG
86
QISQA
91
FPQPP
96
PMIPQ
101
QQREG
106
FVSFD
111
NPASA
116
QTAIQ
121
AMNGF
126
QIGMK
131
RLKVQ
136
LKRPK
141
DANRP
146
Y
151
Mutation Information
DNA mutation:
None
Peptide Range:
95 ~ 119
Mut AA position:
107 (13 in Wild Type peptide)
Alignment
Wild Type:
"AFPQPPPMIPQQQREGFVSFDNPAS
||||||||||||.||||||||||||
Mutant:
AFPQPPPMIPQQRREGFVSFDNPAS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CELF4

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay