Immunogenicity 1028

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
OR51J1
Transcript ID
ENST00000332043
HLA INFO
A*25:01
TCR INFO

No TCR info found!

T cell Tumor cell A*25:01
sequence
Full length protein sequence (316 aa)
MKISN
1
NSLGF
6
LPTTF
11
ILVGI
16
PGLES
21
EHLWI
26
SVPFS
31
LIYII
36
IFLGN
41
GIILH
46
VIRTD
51
IALHQ
56
PMYLF
61
LAMLA
66
LAEVR
71
VSAST
76
LPTVL
81
GIFLF
86
GNTEI
91
SLEAC
96
LFPDV
101
LHPFF
106
IHDGA
111
SCAAG
116
HVFGP
121
LYSHL
126
QPTEL
131
HSYPD
136
TAQGL
141
WHRSY
146
YRTEK
151
HYAHG
156
SVAHS
161
LMASA
166
LLWPQ
171
CPLTF
176
LLSAP
181
QSYLS
186
CGNIS
191
VNNIY
196
GIFIV
201
TSTFG
206
LDSLL
211
IVISY
216
GLILH
221
TVLGI
226
ATGEG
231
RKKAL
236
NTCGS
241
HVCAV
246
LAYYV
251
PMIGL
256
SIVHR
261
LGHRV
266
SPLLQ
271
AMMAN
276
AYLFF
281
PPVVN
286
PIVYS
291
IKTKE
296
IHGAI
301
VRMLL
306
EKRRR
311
V
316
Mutation Information
DNA mutation:
None
Peptide Range:
295 ~ 316
Mut AA position:
307 (13 in Wild Type peptide)
Alignment
Wild Type:
"SIKTKEIHGAIVRMLLEKRRRV
||||||||||||.|||||||||
Mutant:
SIKTKEIHGAIVQMLLEKRRRV"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000184321

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay