Immunogenicity 10477

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
DAP
Transcript ID
uc003jez.4
HLA INFO
DQA*01:03 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:02
sequence
Full length protein sequence (102 aa)
MSSPP
1
EGKLE
6
TKAGH
11
PPAVK
16
AGGMR
21
IVQKH
26
PHTGD
31
TKEEK
36
DKDDQ
41
EWESP
46
SPPKP
51
TVFIS
56
GVIAR
61
GDKDF
66
PPAAA
71
QVAHQ
76
KPHAS
81
MDKHP
86
SPRTQ
91
HIQQP
96
RK
101
Mutation Information
DNA mutation:
None
Peptide Range:
3 ~ 27
Mut AA position:
15 (13 in Wild Type peptide)
Alignment
Wild Type:
"SPPEGKLETKAGHPPAVKAGGMRIV
||||||||||||.||||||||||||
Mutant:
SPPEGKLETKAGPPPAVKAGGMRIV"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) DAP

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay