Immunogenicity 10518

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
RUNDC3B
Transcript ID
uc003ujd.3
HLA INFO
B*35:03
TCR INFO

No TCR info found!

T cell Tumor cell B*35:03
sequence
Full length protein sequence (329 aa)
MGQVT
1
WFGYE
6
SPRSF
11
WDYIR
16
VACRK
21
VSQNC
26
ICSIE
31
NMENV
36
SSSRA
41
KGRAW
46
IRVAL
51
MEKHL
56
SEYIS
61
TALRD
66
FKTTR
71
RFYED
76
GAIVL
81
GEEAN
86
MLAGM
91
LLGLN
96
AIDFS
101
FCLKG
106
EGLDG
111
SFPAV
116
IDYTP
121
YLKYI
126
QSSDS
131
ISSDE
136
EELRT
141
LGSSG
146
SESST
151
PENVG
156
PPFLM
161
DENSW
166
FNKCK
171
RVKQK
176
YQLTL
181
EQKGY
186
LEELL
191
RLREN
196
QLSES
201
VSQNK
206
ILLQR
211
IEDSD
216
LAHKL
221
EKEQL
226
EYIIV
231
ELQDQ
236
LKSYQ
241
SLDQL
246
SAEVS
251
LSQTS
256
LDPGQ
261
SQEGD
266
GKQDT
271
LNVMS
276
EGKED
281
TPSLL
286
GLCGS
291
LTSVA
296
SYKSL
301
TSLKS
306
NDYLA
311
SPTTE
316
MTSPG
321
LTPS
326
Mutation Information
DNA mutation:
None
Peptide Range:
212 ~ 236
Mut AA position:
224 (13 in Wild Type peptide)
Alignment
Wild Type:
"LLQRIEDSDLAHKLEKEQLEYIIVE
||||||||||||.||||||||||||
Mutant:
LLQRIEDSDLAHELEKEQLEYIIVE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) RUNDC3B

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay