Immunogenicity 10631
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
C9orf72
Transcript ID
NM_001256054
HLA INFO
A*68:01
TCR INFO
No TCR info found!
Full length protein sequence (481 aa)
MSTLC
1
PPPSP
6
AVAKT
11
EIALS
16
GKSPL
21
LAATF
26
AYWDN
31
ILGPR
36
VRHIW
41
APKTE
46
QVLLS
51
DGEIT
56
FLANH
61
TLNGE
66
ILRNA
71
ESGAI
76
DVKFF
81
VLSEK
86
GVIIV
91
SLIFD
96
GNWNG
101
DRSTY
106
GLSII
111
LPQTE
116
LSFYL
121
PLHRV
126
CVDRL
131
THIIR
136
KGRIW
141
MHKER
146
QENVQ
151
KIILE
156
GTERM
161
EDQGQ
166
SIIPM
171
LTGEV
176
IPVME
181
LLSSM
186
KSHSV
191
PEEID
196
IADTV
201
LNDDD
206
IGDSC
211
HEGFL
216
LNAIS
221
SHLQT
226
CGCSV
231
VVGSS
236
AEKVN
241
KIVRT
246
LCLFL
251
TPAER
256
KCSRL
261
CEAES
266
SFKYE
271
SGLFV
276
QGLLK
281
DSTGS
286
FVLPF
291
RQVMY
296
APYPT
301
THIDV
306
DVNTV
311
KQMPP
316
CHEHI
321
YNQRR
326
YMRSE
331
LTAFW
336
RATSE
341
EDMAQ
346
DTIIY
351
TDESF
356
TPDLN
361
IFQDV
366
LHRDT
371
LVKAF
376
LDQVF
381
QLKPG
386
LSLRS
391
TFLAQ
396
FLLVL
401
HRKAL
406
TLIKY
411
IEDDT
416
QKGKK
421
PFKSL
426
RNLKI
431
DLDLT
436
AEGDL
441
NIIMA
446
LAEKI
451
KPGLH
456
SFIFG
461
RPFYT
466
SVQER
471
DVLMT
476
F
481
Mutation Information
DNA mutation:
None
Peptide Range:
355 ~ 379
Mut AA position:
367 (13 in Wild Type peptide)
Alignment
Wild Type:
"YTDESFTPDLNIFQDVLHRDTLVKA
||||||||||||.||||||||||||
Mutant:
YTDESFTPDLNILQDVLHRDTLVKA"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) C9orf72
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
None
Assay
IFNg ELISPOT assay