Immunogenicity 10657
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
SYDE2
Transcript ID
NM_032184
HLA INFO
DRB*13:01
TCR INFO
No TCR info found!
Full length protein sequence (1194 aa)
MHDLP
1
PDSGA
6
RRGGR
11
GLADH
16
SFPAG
21
ARAPG
26
QPPSR
31
GAAYR
36
RACPR
41
DGERG
46
GGGRP
51
RQQVS
56
PPRSP
61
QREPR
66
GGQLR
71
TPRMR
76
PSCSR
81
SLESL
86
RVGAK
91
PPPFQ
96
RWPSD
101
SWIRC
106
GAHRD
111
WDEPP
116
PRGGR
121
MDGWS
126
GDRAR
131
AAAPT
136
GLQPP
141
GCKDH
146
GCSSG
151
SPFRD
156
PAGSS
161
VIRSG
166
KGDRQ
171
EGPSF
176
LRPPA
181
VTVKK
186
LQKWM
191
YKGRL
196
LSLGM
201
KGRAR
206
GTAPK
211
VTGTQ
216
AASPN
221
VGALK
226
VRENR
231
VLSVP
236
PDQRI
241
TLTDL
246
FENAY
251
GSSMK
256
GRELE
261
ELKDN
266
IEFRG
271
HKPLN
276
SITVS
281
KKRNW
286
LYQST
291
LRPLN
296
LEEEN
301
KKCQD
306
RSHLS
311
ISPVS
316
LPKHQ
321
LSQSF
326
LKSSK
331
EYCTY
336
VVCNA
341
TNSSL
346
SKNCA
351
LDFNE
356
ENDAD
361
DEGEI
366
WYNPI
371
PEDDD
376
LGISS
381
ALSFG
386
EADSA
391
VLKLP
396
AVNLS
401
MLSGS
406
DLMKA
411
ERHTE
416
DSLCS
421
SEHAG
426
DIQTT
431
RSNGM
436
NPIHP
441
AHSTE
446
FVQQY
451
KQKLG
456
HKTQE
461
GIMVE
466
DSPML
471
KSPFA
476
GSGIL
481
AATNS
486
TELGI
491
MEPSS
496
PNPSP
501
VKKGS
506
SINWS
511
LPDKI
516
KSPRT
521
VRKLS
526
MKMKK
531
LPEFS
536
RKLSV
541
KGTLN
546
YINSP
551
DNTPS
556
LSKYN
561
CREVH
566
HTDIL
571
PSGNT
576
TTAAK
581
RNVIS
586
RYHLD
591
TSVSS
596
QQSYQ
601
KKNSM
606
SSKYS
611
CKGGY
616
LSDGD
621
SPELT
626
TKASK
631
HGSEN
636
KFGKG
641
KEIIS
646
NSCSK
651
NEIDI
656
DAFRH
661
YSFSD
666
QPKCS
671
QYISG
676
LMSVH
681
FYGAE
686
DLKPP
691
RIDSK
696
DVFCA
701
IQVDS
706
VNKAR
711
TALLT
716
CRTTF
721
LDMDH
726
TFNIE
731
IENAQ
736
HLKLV
741
VFSWE
746
PTPRK
751
NRVCC
756
HGTVV
761
LPTLF
766
RVTKT
771
HQLAV
776
KLEPR
781
GLIYV
786
KVTLM
791
EQWEN
796
SLHGL
801
DINQE
806
PIIFG
811
VDIQK
816
VVEKE
821
NIGLM
826
VPLLI
831
QKCIM
836
EIEKR
841
GCQVV
846
GLYRL
851
CGSAA
856
VKKEL
861
REAFE
866
RDSKA
871
VGLCE
876
NQYPD
881
INVIT
886
GVLKD
891
YLREL
896
PSPLI
901
TKQLY
906
EAVLD
911
AMAKS
916
PLKMS
921
SNGCE
926
NDPGD
931
SKYTV
936
DLLDC
941
LPEIE
946
KATLK
951
MLLDH
956
LKLVA
961
SYHEV
966
NKMTC
971
QNLAV
976
CFGPV
981
LLSQR
986
QEPST
991
HNNRV
996
FTDSE
1001
ELASA
1006
LDFKK
1011
HIEVL
1016
HYLLQ
1021
LWPVQ
1026
RLTVK
1031
KSTDN
1036
LFPEQ
1041
KSSLN
1046
YLRQK
1051
KERPH
1056
MLNLS
1061
GTDSS
1066
GVLRP
1071
RQNRL
1076
DSPLS
1081
NRYAG
1086
DWSSC
1091
GENYF
1096
LNTKE
1101
NLNDV
1106
DYDDV
1111
PSEDR
1116
KIGEN
1121
YSKMD
1126
GPEVM
1131
IEQPI
1136
PMSKE
1141
CTFQT
1146
YLTMQ
1151
TVEST
1156
VDRKN
1161
NLKDL
1166
QESID
1171
TLIGN
1176
LEREL
1181
NKNKL
1186
NMSF
1191
Mutation Information
DNA mutation:
None
Peptide Range:
1073 ~ 1097
Mut AA position:
1085 (13 in Wild Type peptide)
Alignment
Wild Type:
"LRPRQNRLDSPLSNRYAGDWSSCGE
||||||||||||.||||||||||||
Mutant:
LRPRQNRLDSPLGNRYAGDWSSCGE"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) SYDE2
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
None
Assay
IFNg ELISPOT assay