Immunogenicity 10701

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
REEP1
Transcript ID
NM_001164731
HLA INFO
DRB*07:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*07:01
sequence
Full length protein sequence (174 aa)
MDHLQ
1
AGGVK
6
WMMYW
11
IIFAL
16
FTTAE
21
TFTDI
26
FLCWF
31
PFYYE
36
LKIAF
41
VAWLL
46
SPYTK
51
GSSLL
56
YRKFV
61
HPTLS
66
SKEKE
71
IDDCL
76
VQAKD
81
RSYDA
86
LVHFG
91
KRGLN
96
VAATA
101
AVMAA
106
SKGQG
111
ALSER
116
LRSFS
121
MQDLT
126
TIRGD
131
GAPAP
136
SGPPP
141
PGSGR
146
ASGKH
151
GQPKM
156
SRSAS
161
ESASS
166
SGTA
171
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 18
Mut AA position:
6 (6 in Wild Type peptide)
Alignment
Wild Type:
"MDHLQAGGVKWMMYWIIFALFTTAE
|||||.||||||||||||
Mutant:
MDHLQDGGVKWMMYWIIF-------"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) REEP1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay