Immunogenicity 11273
Sample ID
3775
Response
Negative
Tumor Type
Cervical Carcinoma(HPV+)
Gene Symbol
SMG5
Transcript ID
uc001foc.4
HLA INFO
C*03:04
TCR INFO
No TCR info found!
Full length protein sequence (1016 aa)
MSQGP
1
PTGES
6
SEPEA
11
KVLHT
16
KRLYR
21
AVVEA
26
VHRLD
31
LILCN
36
KTAYQ
41
EVFKP
46
ENISL
51
RNKLR
56
ELCVK
61
LMFLH
66
PVDYG
71
RKAEE
76
LLWRK
81
VYYEV
86
IQLIK
91
TNKKH
96
IHSRS
101
TLECA
106
YRTHL
111
VAGIG
116
FYQHL
121
LLYIQ
126
SHYQL
131
ELQCC
136
IDWTH
141
VTDPL
146
IGCKK
151
PVSAS
156
GKEMD
161
WAQMA
166
CHRCL
171
VYLGD
176
LSRYQ
181
NELAG
186
VDTEL
191
LAERF
196
YYQAL
201
SVAPQ
206
IGMPF
211
NQLGT
216
LAGSK
221
YYNVE
226
AMYCY
231
LRCIQ
236
SEVSF
241
EGAYG
246
NLKRL
251
YDKAA
256
KMYHQ
261
LKKCE
266
TRKLS
271
PGKKR
276
CKDIK
281
RLLVN
286
FMYLQ
291
SLLQP
296
KSSSV
301
DSELT
306
SLCQS
311
VLEDF
316
NLCLF
321
YLPSS
326
PNLSL
331
ASEDE
336
EEYES
341
GYAFL
346
PDLLI
351
FQMVI
356
ICLMC
361
VHSLE
366
RAGSK
371
QYSAA
376
IAFTL
381
ALFSH
386
LVNHV
391
NIRLQ
396
AELEE
401
GENPV
406
PAFQS
411
DGTDE
416
PESKE
421
PVEKE
426
EEPDP
431
EPPPV
436
TPQVG
441
EGRKS
446
RKFSR
451
LSCLR
456
RRRHP
461
PKVGD
466
DSDLS
471
EGFES
476
DSSHD
481
SARAS
486
EGSDS
491
GSDKS
496
LEGGG
501
TAFDA
506
ETDSE
511
MNSQE
516
SRSDL
521
EDMEE
526
EEGTR
531
SPTLE
536
PPRGR
541
SEAPD
546
SLNGP
551
LGPSE
556
ASIAS
561
NLQAM
566
STQMF
571
QTKRC
576
FRLAP
581
TFSNL
586
LLQPT
591
TNPHT
596
SASHR
601
PCVNG
606
DVDKP
611
SEPAS
616
EEGSE
621
SEGSE
626
SSGRS
631
CRNER
636
SIQEK
641
LQVLM
646
AEGLL
651
PAVKV
656
FLDWL
661
RTNPD
666
LIIVC
671
AQSSQ
676
SLWNR
681
LSVLL
686
NLLPA
691
AGELQ
696
ESGLA
701
LCPEV
706
QDLLE
711
GCELP
716
DLPSS
721
LLLPE
726
DMALR
731
NLPPL
736
RAAHR
741
RFNFD
746
TDRPL
751
LSTLE
756
ESVVR
761
ICCIR
766
SFGHF
771
IARLQ
776
GSILQ
781
FNPEV
786
GIFVS
791
IAQSE
796
QESLL
801
QQAQA
806
QFRMA
811
QEEAR
816
RNRLM
821
RDMAQ
826
LRLQL
831
EVSQL
836
EGSLQ
841
QPKAQ
846
SAMSP
851
YLVPD
856
TQALC
861
HHLPV
866
IRQLA
871
TSGRF
876
IVIIP
881
RTVID
886
GLDLL
891
KKEHP
896
GARDG
901
IRYLE
906
AEFKK
911
GNRYI
916
RCQKE
921
VGKSF
926
ERHKL
931
KRQDA
936
DAWTL
941
YKILD
946
SCKQL
951
TLAQG
956
AGEED
961
PSGMV
966
TIITG
971
LPLDN
976
PSVLS
981
GPMQA
986
ALQAA
991
AHASV
996
DIKNV
1001
LDFYK
1006
QWKEI
1011
G
1016
Mutation Information
DNA mutation:
None
Peptide Range:
450 ~ 474
Mut AA position:
462 (13 in Wild Type peptide)
Alignment
Wild Type:
"SRKFSRLSCLRRRRHPPKVGDDSDL
||||||||||||.||||||||||||
Mutant:
SRKFSRLSCLRRHRHPPKVGDDSDL"
Science, 2017
Landscape of immunogenic tumor antigens in successful immunotherapy of virally induced epithelial cancerGene Name (from Reference) SMG5
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay