Immunogenicity 1133

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RBPJ
Transcript ID
ENST00000510778
HLA INFO
B*07:02
TCR INFO

No TCR info found!

T cell Tumor cell B*07:02
sequence
Full length protein sequence (229 aa)
MNLHF
1
VFIFS
6
KVIHS
11
SWFLN
16
TCLKI
21
GLTFL
26
CPWGA
31
PTIFE
36
TMRKF
41
GERPP
46
PKRLT
51
REAMR
56
NYLKE
61
RGDQT
66
VLILH
71
AKVAQ
76
KSYGN
81
EKRFF
86
CPPPC
91
VYLMG
96
SGWKK
101
KKEQM
106
ERDGC
111
SEQES
116
QPCAF
121
IGIGN
126
SDQEM
131
QQLNL
136
EGKNY
141
CTAKT
146
LYISD
151
SDKRK
156
HFMLS
161
VKMFY
166
GNSDD
171
IGVFL
176
SKRIK
181
VISKP
186
SKKKQ
191
SLKNA
196
DLCIA
201
SGTKV
206
ALFNR
211
LRSQT
216
VSTRY
221
LHVE
226
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 22
Mut AA position:
10 (10 in Wild Type peptide)
Alignment
Wild Type:
"MNLHFVFIFSKVIHSSWFLNTCLKI
|||||||||.||||||||||||
Mutant:
MNLHFVFIFAKVIHSSWFLNTC---"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000168214

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay