Immunogenicity 12003
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
FAM171A1
Transcript ID
uc001iob.3
HLA INFO
A*02:01
TCR INFO
No TCR info found!
Full length protein sequence (890 aa)
MSRSA
1
TLLLC
6
LLGCH
11
VWKAV
16
TKTLR
21
EPGAG
26
AQEVT
31
LKVHI
36
SDAST
41
HQPVA
46
DALIE
51
IFTNQ
56
ASIAS
61
GTSGT
66
DGVAF
71
IKFQY
76
KLGSQ
81
LIVTA
86
SKHAY
91
VPNSA
96
PWKPI
101
RLPVF
106
SSLSL
111
GLLPE
116
RSATL
121
MVYED
126
VVQIV
131
SGFQG
136
ARPQP
141
RVHFQ
146
RRALR
151
LPENT
156
SYSDL
161
TAFLT
166
AASSP
171
SEVDS
176
FPYLR
181
GLDGN
186
GTGNS
191
TRHDL
196
TPVTA
201
VSVHL
206
LSSNG
211
TPVLV
216
DGPIY
221
VTVPL
226
ATQSS
231
LRHNA
236
YVAAW
241
RFDQK
246
LGTWL
251
KSGLG
256
LVHQE
261
GSQLT
266
WTYIA
271
PQLGY
276
WVAAM
281
SPPIP
286
GPVVT
291
QDITT
296
YHTVF
301
LLAIL
306
GGMAF
311
ILLVL
316
LCLLL
321
YYCRR
326
KCLKP
331
RQHHR
336
KLQLP
341
AGLES
346
SKRDQ
351
STSMS
356
HINLL
361
FSRRA
366
SEFPG
371
PLSVT
376
SHGRP
381
EAPGT
386
KELMS
391
GVHLE
396
MMSPG
401
GEGDL
406
HTPML
411
KLSYS
416
TSQEF
421
SSREE
426
LLSCK
431
EEDKS
436
QISFD
441
NLTPS
446
GTLGK
451
DYHKS
456
VEVFP
461
LKARK
466
SMERE
471
GYESS
476
GNDDY
481
RGSYN
486
TVLSQ
491
PLFEK
496
QDREG
501
PASTG
506
SKLTI
511
QEHLY
516
PAPSS
521
PEKEQ
526
LLDRR
531
PTECM
536
MSRSV
541
DHLER
546
PTSFP
551
RPGQL
556
ICCSS
561
VDQVN
566
DSVYR
571
KVLPA
576
LVIPA
581
HYMKL
586
PGDHS
591
YVSQP
596
LVVPA
601
DQQLE
606
IERLQ
611
AELSN
616
PHAGI
621
FPHPS
626
SQIQP
631
QPLSS
636
QAISQ
641
QHLQD
646
AGTRE
651
WSPQN
656
ASMSE
661
SLSIP
666
ASLND
671
AALAQ
676
MNSEV
681
QLLTE
686
KALME
691
LGGGK
696
PLPHP
701
RAWFV
706
SLDGR
711
SNAHV
716
RHSYI
721
DLQRA
726
GRNGS
731
NDASL
736
DSGVD
741
MNEPK
746
SARKG
751
RGDAL
756
SLQQN
761
YPPVQ
766
EHQQK
771
EPRAP
776
DSTAY
781
TQLVY
786
LDDVE
791
QSGSE
796
CGTTV
801
CTPED
806
SALRC
811
LLEGS
816
SRRSG
821
GQLPS
826
LQEET
831
TRRTA
836
DAPSE
841
PAASP
846
HQRRS
851
AHEEE
856
EDDDD
861
DDQGE
866
DKKSP
871
WQKRE
876
ERPLM
881
AFNIK
886
Mutation Information
DNA mutation:
None
Peptide Range:
386 ~ 410
Mut AA position:
398 (13 in Wild Type peptide)
Alignment
Wild Type:
"EAPGTKELMSGVHLEMMSPGGEGDL
||||||||||||.||||||||||||
Mutant:
EAPGTKELMSGVYLEMMSPGGEGDL"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) FAM171A1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay