Immunogenicity 12017

summary
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
CSGALNACT2
Transcript ID
uc001jan.4
HLA INFO
B*27:02
TCR INFO

No TCR info found!

T cell Tumor cell B*27:02
sequence
Full length protein sequence (542 aa)
MPRRG
1
LILHT
6
RTHWL
11
LLGLA
16
LLCSL
21
VLFMY
26
LLECA
31
PQTDG
36
NASLP
41
GVVGE
46
NYGKE
51
YYQAL
56
LQEQE
61
EHYQT
66
RATSL
71
KRQIA
76
QLKQE
81
LQEMS
86
EKMRS
91
LQERR
96
NVGAN
101
GIGYQ
106
SNKEQ
111
APSDL
116
LEFLH
121
SQIDK
126
AEVSI
131
GAKLP
136
SEYGV
141
IPFES
146
FTLMK
151
VFQLE
156
MGLTR
161
HPEEK
166
PVRKD
171
KRDEL
176
VEVIE
181
AGLEV
186
INNPD
191
EDDEQ
196
EDEEG
201
PLGEK
206
LIFNE
211
NDFVE
216
GYYRT
221
ERDKG
226
TQYEL
231
FFKKA
236
DLTEY
241
RHVTL
246
FRPFG
251
PLMKV
256
KSEMI
261
DITRS
266
IINII
271
VPLAE
276
RTEAF
281
VQFMQ
286
NFRDV
291
CIHQD
296
KKIHL
301
TVVYF
306
GKEGL
311
SKVKS
316
ILESV
321
TSESN
326
FHNYT
331
LVSLN
336
EEFNR
341
GRGLN
346
VGARA
351
WDKGE
356
VLMFF
361
CDVDI
366
YFSAE
371
FLNSC
376
RLNAE
381
PGKKV
386
FYPVV
391
FSLYN
396
PAIVY
401
ANQEV
406
PPPVE
411
QQLVH
416
KKDSG
421
FWRDF
426
GFGMT
431
CQYRS
436
DFLTI
441
GGFDM
446
EVKGW
451
GGEDV
456
HLYRK
461
YLHGD
466
LIVIR
471
TPVPG
476
LFHLW
481
HEKRC
486
ADELT
491
PEQYR
496
MCIQS
501
KAMNE
506
ASHSH
511
LGMLV
516
FREEI
521
ETHLH
526
KQAYR
531
TNSEA
536
VG
541
Mutation Information
DNA mutation:
None
Peptide Range:
292 ~ 316
Mut AA position:
304 (13 in Wild Type peptide)
Alignment
Wild Type:
"FRDVCIHQDKKIHLTVVYFGKEGLS
||||||||||||.||||||||||||
Mutant:
FRDVCIHQDKKIYLTVVYFGKEGLS"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

PBMCs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay