Immunogenicity 1204
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RGPD3
Transcript ID
ENST00000304514
HLA INFO
B*56:01
TCR INFO
No TCR info found!
Full length protein sequence (1766 aa)
MSCSK
1
AYGER
6
YVASV
11
QGSAP
16
SPRKK
21
STRGF
26
YFAKL
31
YYEAK
36
EYDLA
41
KKYIC
46
TYINV
51
REMDP
56
RAHRF
61
LGLLY
66
ELEEN
71
TEKAV
76
ECYRR
81
SVELN
86
PTQKD
91
LVLKI
96
AELLC
101
KNDVT
106
DGRAE
111
YWVER
116
AAKLF
121
PGSPA
126
IYKLK
131
EQLLD
136
CEGED
141
GWNKL
146
FDLIQ
151
SELYV
156
RPDDV
161
HVNIR
166
LVELY
171
RSTKR
176
LKDAV
181
ARCHE
186
AERNI
191
ALRSS
196
LEWNS
201
CVVQT
206
LKEYL
211
ESLQC
216
LESDK
221
SDWRA
226
TNTDL
231
LLAYA
236
NLMLL
241
TLSTR
246
DVQES
251
RELLE
256
SFDSA
261
LQSAK
266
SSLGG
271
NDELS
276
ATFLE
281
MKGHF
286
YMHAG
291
SLLLK
296
MGQHG
301
NNVQW
306
RALSE
311
LAALC
316
YLIAF
321
QVPRP
326
KIKLI
331
KGEAG
336
QNLLE
341
MMACD
346
RLSQS
351
GHMLL
356
NLSRG
361
KQDFL
366
KVVVE
371
TFANK
376
SGQSA
381
LYDAL
386
FSSQS
391
PKDTS
396
FLGSD
401
DIGNI
406
DVQEP
411
ELEDL
416
ARYDV
421
GAIRA
426
HNGSL
431
QHLTW
436
LGLQW
441
NSLPA
446
LPGIR
451
KWLKQ
456
LFHHL
461
PQETS
466
RLETN
471
APESI
476
CILDL
481
EVFLL
486
GVVYT
491
SHLQL
496
KEKCN
501
SHHSS
506
YQPLC
511
LPLPV
516
CKQLC
521
TERQK
526
SWWDA
531
VCTLI
536
HRKAV
541
PGNSA
546
KLRLL
551
VQHEI
556
NTLRA
561
QEKHG
566
LQPAL
571
LVHWA
576
KCLQK
581
MGSGL
586
NSFYD
591
QREYI
596
GRSVH
601
YWKKV
606
LPLLK
611
IIKKK
616
NSIPE
621
PIDPL
626
FKHFH
631
SVDIQ
636
ASEIV
641
EYEED
646
AHVTF
651
AILDA
656
VNGNI
661
EDAMT
666
AFESI
671
KSVVS
676
YWNLA
681
LIFHR
686
KAEDI
691
ANDAL
696
SPEEQ
701
EECKN
706
YLRKT
711
RGYLI
716
KILDD
721
SDSNL
726
SVVKK
731
LPVPL
736
ESVKE
741
MLKSV
746
MQELE
751
NYSEG
756
GPLYK
761
NGSLR
766
NADSE
771
IKHST
776
PSPTK
781
YSLSP
786
SKSYK
791
YSPKT
796
PPRWA
801
EDQNS
806
LLKMI
811
RQEVK
816
AIKEE
821
MQELK
826
LNSSK
831
SASHH
836
RWPTE
841
NYGPD
846
SVPDG
851
YQGSQ
856
TFHGA
861
PLTVA
866
TTGPS
871
VYYSQ
876
SPAYN
881
SQYLL
886
RPAAN
891
VTPTK
896
GSSNT
901
EFKST
906
KEGFS
911
IPVSA
916
DGFKF
921
GISEP
926
GNQEK
931
KSEKP
936
LENDT
941
GLQAQ
946
DISGR
951
KKGRG
956
VIFGQ
961
TSSTF
966
TFADV
971
AKSTS
976
GEGFQ
981
FGKKD
986
LNFKG
991
FSGAG
996
EKLFS
1001
SQYGK
1006
MANKA
1011
NTSGD
1016
FEKDD
1021
DAYKT
1026
EDSDD
1031
IHFEP
1036
VVQMP
1041
EKVEL
1046
VTGEE
1051
GEKVL
1056
YSQGV
1061
KLFRF
1066
DAEVS
1071
QWKER
1076
GLGNL
1081
KILKN
1086
EVNGK
1091
VRMLM
1096
QREQV
1101
LKVCA
1106
NHWIT
1111
TTMNL
1116
KPLSG
1121
SDRAW
1126
MWSAS
1131
DFSDG
1136
DAKLE
1141
RLAAK
1146
FKTPE
1151
LAEEF
1156
KQKFE
1161
ECQRL
1166
LLDIP
1171
LQTPH
1176
KLVDT
1181
GRAAK
1186
LIQRA
1191
EEMKS
1196
GLKDF
1201
KTFLT
1206
NDQTK
1211
VAEEE
1216
NKGSG
1221
TGAAG
1226
ASDTT
1231
IKPNA
1236
ENTGP
1241
TLEWD
1246
NYDLR
1251
EDALD
1256
DSVSS
1261
SSVHA
1266
SPLAS
1271
SPVRK
1276
NLFHF
1281
DESTT
1286
GSNFS
1291
FKSAL
1296
SLSKS
1301
PAKLN
1306
QSGTS
1311
VGTDE
1316
ESDVT
1321
QEEER
1326
DGQYF
1331
EPVVP
1336
LPDLV
1341
EVSSG
1346
EENEQ
1351
VVFSH
1356
RAEFY
1361
RYDKD
1366
VGQWK
1371
ERGIG
1376
DIKIL
1381
QNYDN
1386
KHVRI
1391
LMRRD
1396
QVLKL
1401
CANHR
1406
ITPDM
1411
SLQNM
1416
KGTER
1421
VWVWT
1426
ACDFA
1431
DGERK
1436
VEHLA
1441
VRFKL
1446
QDVAD
1451
SFKKI
1456
FDEAK
1461
TAQEK
1466
DSLIT
1471
PHVSR
1476
SSTPR
1481
ESPCG
1486
KIAVA
1491
VLEET
1496
TRERT
1501
DVIQG
1506
DDVAD
1511
AASEV
1516
EVSST
1521
SETTT
1526
KAVVS
1531
PPKFV
1536
FGSES
1541
VKRIF
1546
SSEKS
1551
KPFAF
1556
GNSSA
1561
TGSLF
1566
GFSFN
1571
APLKS
1576
NNSET
1581
SSVAQ
1586
SGSES
1591
KVEPK
1596
KCELS
1601
KNSDI
1606
EQSSD
1611
SKVKN
1616
LSASF
1621
PTEES
1626
SINYT
1631
FKTPE
1636
KEPPL
1641
WYAEF
1646
TKEEL
1651
VQKLS
1656
STTKS
1661
ADHLN
1666
GLLRE
1671
IEATN
1676
AVLME
1681
QIKLL
1686
KSEIR
1691
RLERN
1696
QEQEV
1701
SAANV
1706
EHLKN
1711
VLLQF
1716
IFLKP
1721
GSERE
1726
RLLPV
1731
INTML
1736
QLSLE
1741
EKGKL
1746
AAVAQ
1751
AERGF
1756
VLNST
1761
F
1766
Mutation Information
DNA mutation:
None
Peptide Range:
226 ~ 250
Mut AA position:
238 (13 in Wild Type peptide)
Alignment
Wild Type:
"SDWRATNTDLLLAYANLMLLTLSTR
||||||||||||.||||||||||||
Mutant:
SDWRATNTDLLLTYANLMLLTLSTR"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RGPD3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay