Immunogenicity 125

summary
Sample ID
4196
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
PRKN
Transcript ID
uc031sqz.1
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (503 aa)
MFTAR
1
VTFNS
6
DNCTY
11
SLKNS
16
EPQPE
21
SGRLY
26
TRPER
31
EYPIT
36
VFVRF
41
NSSHG
46
FPVEV
51
DSDTS
56
IFQLK
61
EVVAK
66
RQGVP
71
ADQLR
76
VIFAG
81
KELRN
86
DWTVQ
91
NCDLD
96
QQSIV
101
HIVQR
106
PWRKG
111
QEMNA
116
TGGDD
121
PRNAA
126
GGCER
131
EPQSL
136
TRVDL
141
SSSVL
146
PGDSV
151
GLAVI
156
LHTDS
161
RKDSP
166
PAGSP
171
AGRSI
176
YNSFY
181
VYCKG
186
PCQRV
191
QPGKL
196
RVQCS
201
TCRQA
206
TLTLT
211
QGPSC
216
WDDVL
221
IPNRM
226
SGECQ
231
SPHCP
236
GTSAE
241
FFFKC
246
GAHPT
251
SDKET
256
SVALH
261
LIATN
266
SRNIT
271
CITCT
276
DVRSP
281
VLVFQ
286
CNSRH
291
VICLD
296
CFHLY
301
CVTRL
306
NDRQF
311
VHDPQ
316
LGYSL
321
PCVAG
326
CPNSL
331
IKELH
336
HFRIL
341
GEEQY
346
NRYQQ
351
YGAEE
356
CVLQM
361
GGVLC
366
PRPGC
371
GAGLL
376
PEPDQ
381
RKVTC
386
EGGNG
391
LGCGF
396
AFCRE
401
CKEAY
406
HEGEC
411
SAVFE
416
ASGTT
421
TQAYR
426
VDERA
431
AEQAR
436
WEAAS
441
KETIK
446
KTTKP
451
CPRCH
456
VPVEK
461
NGGCM
466
HMKCP
471
QPQCR
476
LEWCW
481
NCGCE
486
WNRVC
491
MGDHW
496
FDV
501
Mutation Information
DNA mutation:
c.G1238A
Peptide Range:
374 ~ 398
Mut AA position:
None (13 in Wild Type peptide)
Alignment
Wild Type:
"GCGAGLLPEPDQRKVTCEGGNGLGC
||||||||||||.||||||||||||
Mutant:
GCGAGLLPEPDQKKVTCEGGNGLGC"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

GCGAGLLPEPDQKKVTCEGGNGLGC

Antigen Type

TMG

T-cell Source

TILs

APC Type

DSs

Assay

ELISPOT