Immunogenicity 12501
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
LINS1
Transcript ID
uc002bwi.3
HLA INFO
B*38:01
TCR INFO
No TCR info found!
Full length protein sequence (436 aa)
MKVFC
1
EVLEE
6
LYKKV
11
LLGAT
16
LENDS
21
HDYIF
26
YLNPA
31
VSDQD
36
CSTAT
41
SLEWA
46
NTCGI
51
QGRHQ
56
PISVG
61
VAPIA
66
VAPVC
71
LKTNS
76
QMSGS
81
REVML
86
LQLTV
91
IKVMT
96
TRILS
101
VKTEF
106
HAKEQ
111
YRDVI
116
KILLE
121
SAKVD
126
SKLIC
131
MFQNS
136
DKLLS
141
HMAAQ
146
CLALL
151
LYFQL
156
REKIT
161
LSNSW
166
IAFCQ
171
KNLSE
176
YSESN
181
KAIYC
186
LWTLT
191
AIIKE
196
IFKDS
201
CSQKT
206
EILKQ
211
FLTHF
216
DTIFE
221
VFYNS
226
LFSQH
231
FENCR
236
DTSKI
241
VNILM
246
CFLDL
251
LELLI
256
ASRIH
261
LKLHF
266
TCQRI
271
LFLKP
276
SCMLE
281
VITWP
286
IQAFV
291
KRKVI
296
IFLKK
301
CLLCK
306
VGEDL
311
CRGSV
316
PALMP
321
PDHHV
326
AVDML
331
ALANA
336
VLQAV
341
NSGLL
346
KTLSV
351
YEKHS
356
FFGGD
361
EVQPE
366
CELIT
371
SPDHV
376
ILRAA
381
SLVIM
386
KSLEI
391
KFQNY
396
SSASE
401
VKGNS
406
PNSFC
411
MQCVI
416
IYLST
421
VIHNY
426
QISGL
431
V
436
Mutation Information
DNA mutation:
None
Peptide Range:
34 ~ 58
Mut AA position:
46 (13 in Wild Type peptide)
Alignment
Wild Type:
"PAVSDQDCSTATSLEWANTCGIQGR
||||||||||||.||||||||||||
Mutant:
PAVSDQDCSTATFLEWANTCGIQGR"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) LINS1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay