Immunogenicity 12505

summary
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
LMF1
Transcript ID
uc021tae.1
HLA INFO
A*24:02
TCR INFO

No TCR info found!

T cell Tumor cell A*24:02
sequence
Full length protein sequence (567 aa)
MRPDS
1
PTMAA
6
PAESL
11
RRRKT
16
GYSDP
21
EPESP
26
PAPGR
31
GPAGS
36
PAHLH
41
TGTFW
46
LTRIV
51
LLKAL
56
AFVYF
61
VAFLV
66
AFHQN
71
KQLIG
76
DRGLL
81
PCRVF
86
LKNFQ
91
QYFQD
96
RTSWE
101
VFSYM
106
PTILW
111
LMDWS
116
DMNSN
121
LDLLA
126
LLGLG
131
ISSFV
136
LITGC
141
ANMLL
146
MAALW
151
GLYMS
156
LVNVG
161
HVWYS
166
FGWES
171
QLLET
176
GFLGI
181
FLCPL
186
WTLSR
191
LPQHT
196
PTSRI
201
VLWGF
206
RWLIF
211
RIMLG
216
AGLIK
221
IRGDR
226
CWRDL
231
TCMDF
236
HYETQ
241
PMPNP
246
VAYYL
251
HHSPW
256
WFHRF
261
ETLSN
266
HFIEL
271
LVPFF
276
LFLGR
281
RACII
286
HGVLQ
291
ILFQA
296
VLIVS
301
GNLSF
306
LNWLT
311
MVPSL
316
ACFDD
321
ATLGF
326
LFPSG
331
PGSLK
336
DRVLQ
341
MQRDI
346
RGARP
351
EPRFG
356
SVVRR
361
AANVS
366
LGVLL
371
AWLSV
376
PVVLN
381
LLSSR
386
QVMNT
391
HFNSL
396
HIVNT
401
YGAFG
406
SITKE
411
RAEVI
416
LQGTA
421
SSNAS
426
APDAM
431
WEDYE
436
FKCKP
441
GDPSR
446
RPCLI
451
SPYHY
456
RLDWL
461
MWFAA
466
FQTYE
471
HNDWI
476
IHLAG
481
KLLAS
486
DAEAL
491
SLLAH
496
NPFAG
501
RPPPR
506
WVRGE
511
HYRYK
516
FSRPG
521
GRHAA
526
EGKWW
531
VRKRI
536
GAYFP
541
PLSLE
546
ELRPY
551
FRDRG
556
WPLPG
561
PL
566
Mutation Information
DNA mutation:
None
Peptide Range:
344 ~ 368
Mut AA position:
356 (13 in Wild Type peptide)
Alignment
Wild Type:
"LQMQRDIRGARPEPRFGSVVRRAAN
||||||||||||.||||||||||||
Mutant:
LQMQRDIRGARPKPRFGSVVRRAAN"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

PBMCs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay