Immunogenicity 12522
Sample ID
3998
Response
Negative
Tumor Type
Melanoma
Gene Symbol
CIITA
Transcript ID
uc010bup.1
HLA INFO
B*18:01
TCR INFO
No TCR info found!
Full length protein sequence (353 aa)
MRCLA
1
PRPAG
6
SYLSE
11
PQGSS
16
QCATM
21
ELGPL
26
EGGYL
31
ELLNS
36
DADPL
41
CLYHF
46
YDQMD
51
LAGEE
56
EIELY
61
SEPDT
66
DTINC
71
DQFSR
76
LLCDM
81
EGDEE
86
TREAY
91
ANIAE
96
LDQYV
101
FQDSQ
106
LEGLS
111
KDIFK
116
HIGPD
121
EVIGE
126
SMEMP
131
AEVGQ
136
KSQKR
141
PFPEE
146
LPADL
151
KHWKP
156
AEPPT
161
VVTGS
166
LLVRP
171
VSDCS
176
TLPCL
181
PLPAL
186
FNQEP
191
ASGQM
196
RLEKT
201
DQIPM
206
PFSSS
211
SLSCL
216
NLPEG
221
PIQFV
226
PTIST
231
LPHGL
236
WQISE
241
AGTGV
246
SSIFI
251
YHGEV
256
PQASQ
261
VPPPS
266
GFTVH
271
GLPTS
276
PDRPG
281
STSPF
286
APSAT
291
DLPSM
296
PEPAL
301
TSRAN
306
MTEHK
311
TSPTQ
316
CPAAG
321
EVSNK
326
LPKWP
331
GREVP
336
RKTQL
341
GSSLL
346
FGT
351
Mutation Information
DNA mutation:
None
Peptide Range:
213 ~ 237
Mut AA position:
225 (13 in Wild Type peptide)
Alignment
Wild Type:
"SSSSLSCLNLPEGPIQFVPTISTLP
||||||||||||.||||||||||||
Mutant:
SSSSLSCLNLPEEPIQFVPTISTLP"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) CIITA
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
COS7
Assay
IFNg ELISPOT assay