Immunogenicity 12913
Sample ID
3926
Response
Negative
Tumor Type
Melanoma
Gene Symbol
PTPRH
Transcript ID
uc010esv.3
HLA INFO
C*06:02
TCR INFO
No TCR info found!
Full length protein sequence (937 aa)
MAGAG
1
GGLGV
6
WGNLV
11
LLGLC
16
SWTGA
21
RAPAP
26
NPGRN
31
LTVET
36
QTTSS
41
ISLSW
46
EVPDG
51
LDSQN
56
SNYWV
61
QCTGD
66
GGTTE
71
TRNTT
76
ATNVT
81
VDGLG
86
PGSLY
91
TCSVW
96
VEKDG
101
VNSSV
106
GTVTT
111
ATAPN
116
PVRNL
121
TVEAQ
126
TNSSI
131
ALTWE
136
VPDGP
141
DPQNS
146
TYGVE
151
YTGDG
156
GRAGT
161
RSTAH
166
TNITV
171
DRLEP
176
GCLYV
181
FSVWV
186
GKNGI
191
NSSRE
196
TRNAT
201
TAPNP
206
VRNLH
211
METQT
216
NSSIA
221
LCWEV
226
PDGPY
231
PQDYT
236
YWVEY
241
TGDGG
246
GTETR
251
NTTNT
256
SVTAE
261
RLEPG
266
TLYTF
271
SVWAE
276
KNGAR
281
GSRQN
286
VSIST
291
VPNAV
296
TSLSK
301
QDWTN
306
STIAL
311
RWTAP
316
QGPGQ
321
SSYSY
326
WVSWV
331
REGMT
336
DPRTQ
341
STSGT
346
DITLK
351
ELEAG
356
SLYHL
361
TVWAE
366
RNEVR
371
GYNST
376
LTAAT
381
APNEV
386
TDLQN
391
ETQTK
396
NSVML
401
WWKAP
406
GDPHS
411
QLYVY
416
WVQWA
421
SKGHP
426
RRGQD
431
PQANW
436
VNQTS
441
RTNET
446
WYKVE
451
ALEPG
456
TLYNF
461
TVWAE
466
RNDVA
471
SSTQS
476
LCAST
481
YPDTV
486
TITSC
491
VSTSA
496
GYGVN
501
LIWSC
506
PQGGY
511
EAFEL
516
EVGGQ
521
RGSQD
526
RSSCG
531
EAVSV
536
LGLGP
541
ARSYP
546
ATITT
551
IWDGM
556
KVVSH
561
SVVCH
566
TESAG
571
VIAGA
576
FVGIL
581
LFLIL
586
VGLLI
591
FFLKR
596
RNKKK
601
QQKPE
606
LRDLV
611
FSSPG
616
DIPAE
621
DFADH
626
VRKNE
631
RDSNC
636
GFADK
641
YQQLS
646
LVGHS
651
QSQMV
656
ASASE
661
NNAKN
666
RYRNV
671
LPYDW
676
SRVPL
681
KPIHE
686
EPGSD
691
YINAS
696
FMPGL
701
WSPQE
706
FIATQ
711
GPLPQ
716
TVGDF
721
WRLVW
726
EQQSH
731
TLVML
736
TNCME
741
AGRVK
746
CEHYW
751
PLDSQ
756
PCTHG
761
HLRVT
766
LVGEE
771
VMENW
776
TVREL
781
LLLQV
786
EEQKT
791
LSVRQ
796
FHYQA
801
WPDHG
806
VPSSP
811
DTLLA
816
FWRML
821
RQWLD
826
QTMEG
831
GPPIV
836
HCSAG
841
VGRTG
846
TLIAL
851
DVLLR
856
QLQSE
861
GLLGP
866
FSFVR
871
KMRES
876
RPLMV
881
QTEAQ
886
YVFLH
891
QCILR
896
FLQQS
901
AQAPA
906
EKEVP
911
YEDVE
916
NLIYE
921
NVAAI
926
QAHKL
931
EV
936
Mutation Information
DNA mutation:
None
Peptide Range:
108 ~ 132
Mut AA position:
120 (13 in Wild Type peptide)
Alignment
Wild Type:
"SSVGTVTTATAPNPVRNLTVEAQTN
||||||||||||.||||||||||||
Mutant:
SSVGTVTTATAPSPVRNLTVEAQTN"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) PTPRH
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay