Immunogenicity 12957
Sample ID
3926
Response
Negative
Tumor Type
Melanoma
Gene Symbol
MSH2
Transcript ID
uc002rvz.4
HLA INFO
A*02:01
TCR INFO
No TCR info found!
Full length protein sequence (975 aa)
MAVQP
1
KETLQ
6
LESAA
11
EVGFV
16
RFFQG
21
MPEKP
26
TTTVR
31
LFDRG
36
DFYTA
41
HGEDA
46
LLAAR
51
EVFKT
56
QGVIK
61
YMGPA
66
GAKNL
71
QSVVL
76
SKMNF
81
ESFVK
86
DLLLV
91
RQYRV
96
EVYKN
101
RAGNK
106
ASKEN
111
DWYLA
116
YKASP
121
GNLSQ
126
FEDIL
131
FGNND
136
MSASI
141
GVVGV
146
KMSAV
151
DGQRQ
156
VGVGY
161
VDSIQ
166
RKLGL
171
CEFPD
176
NDQFS
181
NLEAL
186
LIQIG
191
PKECV
196
LPGGE
201
TAGDM
206
GKLRQ
211
IIQRG
216
GILIT
221
ERKKA
226
DFSTK
231
DIYQD
236
LNRLL
241
KGKKG
246
EQMNS
251
AVLPE
256
MENQV
261
AVSSL
266
SAVIK
271
FLELL
276
SDDSN
281
FGQFE
286
LTTFD
291
FSQYM
296
KLDIA
301
AVRAL
306
NLFQG
311
SVEDT
316
TGSQS
321
LAALL
326
NKCKT
331
PQGQR
336
LVNQW
341
IKQPL
346
MDKNR
351
IEERL
356
NLVEA
361
FVEDA
366
ELRQT
371
LQEDL
376
LRRFP
381
DLNRL
386
AKKFQ
391
RQAAN
396
LQDCY
401
RLYQG
406
INQLP
411
NVIQA
416
LEKHE
421
GKHQK
426
LLLAV
431
FVTPL
436
TDLRS
441
DFSKF
446
QEMIE
451
TTLDM
456
DQVEN
461
HEFLV
466
KPSFD
471
PNLSE
476
LREIM
481
NDLEK
486
KMQST
491
LISAA
496
RDLGL
501
DPGKQ
506
IKLDS
511
SAQFG
516
YYFRV
521
TCKEE
526
KVLRN
531
NKNFS
536
TVDIQ
541
KNGVK
546
FTNSK
551
LTSLN
556
EEYTK
561
NKTEY
566
EEAQD
571
AIVKE
576
IVNIS
581
SGYVE
586
PMQTL
591
NDVLA
596
QLDAV
601
VSFAH
606
VSNGA
611
PVPYV
616
RPAIL
621
EKGQG
626
RIILK
631
ASRHA
636
CVEVQ
641
DEIAF
646
IPNDV
651
YFEKD
656
KQMFH
661
IITGP
666
NMGGK
671
STYIR
676
QTGVI
681
VLMAQ
686
IGCFV
691
PCESA
696
EVSIV
701
DCILA
706
RVGAG
711
DSQLK
716
GVSTF
721
MAEML
726
ETASI
731
LRSAT
736
KDSLI
741
IIDEL
746
GRGTS
751
TYDGF
756
GLAWA
761
ISEYI
766
ATKIG
771
AFCMF
776
ATHFH
781
ELTAL
786
ANQIP
791
TVNNL
796
HVTAL
801
TTEET
806
LTMLY
811
QVKKG
816
VCDQS
821
FGIHV
826
AELAN
831
FPKHV
836
IECAK
841
QKALE
846
LEEFQ
851
YIGES
856
QGYDI
861
MEPAA
866
KKCYL
871
ERENL
876
RVTEP
881
KDQCL
886
ILLTW
891
KRKLR
896
GGKRS
901
ACSRP
906
ERQNQ
911
GSGVI
916
LSPRL
921
ECNAT
926
ISAHC
931
NLCLL
936
DSSDP
941
PTSTS
946
QVAGT
951
TDSCH
956
HAWLR
961
PEIHC
966
LCTQK
971
Mutation Information
DNA mutation:
None
Peptide Range:
890 ~ 914
Mut AA position:
902 (13 in Wild Type peptide)
Alignment
Wild Type:
"LILLTWKRKLRGGKRSACSRPERQN
||||||||||||.||||||||||||
Mutant:
LILLTWKRKLRGEKRSACSRPERQN"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) MSH2
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay