Immunogenicity 13110
Sample ID
3926
Response
Negative
Tumor Type
Melanoma
Gene Symbol
PCIF1
Transcript ID
uc002xqs.3
HLA INFO
A*01:01
TCR INFO
No TCR info found!
Full length protein sequence (704 aa)
MANEN
1
HGSPR
6
EEASL
11
LSHSP
16
GTSNQ
21
SQPCS
26
PKPIR
31
LVQDL
36
PEELV
41
HAGWE
46
KCWSR
51
RENRP
56
YYFNR
61
FTNQS
66
LWEMP
71
VLGQH
76
DVISD
81
PLGLN
86
ATPLP
91
QDSSL
96
VETPP
101
AENKP
106
RKRQL
111
SEEQP
116
SGNGV
121
KKPKI
126
EIPVT
131
PTGQS
136
VPSSP
141
SIPGT
146
PTLKM
151
WGTSP
156
EDKQQ
161
AALLR
166
PTEVY
171
WDLDI
176
QTNAV
181
IKHRG
186
PSEVL
191
PPHPE
196
VELLR
201
SQLIL
206
KLRQH
211
YRELC
216
QQREG
221
IEPPR
226
ESFNR
231
WMLER
236
KVVDK
241
GSDPL
246
LPSNC
251
EPVVS
256
PSMFR
261
EIMND
266
IPIRL
271
SRIKF
276
REEAK
281
RLLFK
286
YAEAA
291
RRLIE
296
SRSAS
301
PDSRK
306
VVKWN
311
VEDTF
316
SWLRK
321
DHSAS
326
KEDYM
331
DRLEH
336
LRRQC
341
GPHVS
346
AAAKD
351
SVEGI
356
CSKIY
361
HISLE
366
YVKRI
371
REKHL
376
AILKE
381
NNISE
386
EVEAP
391
EVEPR
396
LVYCY
401
PVRLA
406
VSAPP
411
MPSVE
416
MHMEN
421
NVVCI
426
RYKGE
431
MVKVS
436
RNYFS
441
KLWLL
446
YRYSC
451
IDDSA
456
FERFL
461
PRVWC
466
LLRRY
471
QMMFG
476
VGLYE
481
GTGLQ
486
GSLPV
491
HVFEA
496
LHRLF
501
GVSFE
506
CFASP
511
LNCYF
516
RQYCS
521
AFPDT
526
DGYFG
531
SRGPC
536
LDFAP
541
LSGSF
546
EANPP
551
FCEEL
556
MDAMV
561
SHFER
566
LLESS
571
PEPLS
576
FIVFI
581
PEWRE
586
PPTPA
591
LTRME
596
QSRFK
601
RHQLI
606
LPAFE
611
HEYRS
616
GSQHI
621
CKKEE
626
MHYKA
631
VHNTA
636
VLFLQ
641
NDPGF
646
AKWAP
651
TPERL
656
QELSA
661
AYRQS
666
GRSHS
671
SGSSS
676
SSSSE
681
AKDRD
686
SGREQ
691
GPSRE
696
PHPT
701
Mutation Information
DNA mutation:
None
Peptide Range:
253 ~ 277
Mut AA position:
265 (13 in Wild Type peptide)
Alignment
Wild Type:
"SNCEPVVSPSMFREIMNDIPIRLSR
||||||||||||.||||||||||||
Mutant:
SNCEPVVSPSMFCEIMNDIPIRLSR"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) PCIF1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay