Immunogenicity 13170
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
CCDC116
Transcript ID
uc002zve.3
HLA INFO
B*38:01
TCR INFO
No TCR info found!
Full length protein sequence (613 aa)
MARCR
1
HHSGY
6
LADDE
11
ASHSM
16
CSARV
21
QLPKK
26
PLVPE
31
MRPAC
36
KPGRV
41
PHPPS
46
TCGSS
51
ALQGQ
56
RRNKR
61
HPQPF
66
GHFLD
71
FLTES
76
QVLDS
81
LETVV
86
EKATE
91
RMAAM
96
KTEAG
101
VPLVE
106
VQDPV
111
EVPSG
116
GRRAH
121
ARPSL
126
STVHR
131
HRVRP
136
TLCTG
141
HPNNY
146
PSSSS
151
SMSNC
156
HSSLM
161
AGCLG
166
SHSRD
171
SDLGA
176
QGSLP
181
PVRDK
186
LLLEK
191
NLKRL
196
LQLER
201
EGKGL
206
SQSCS
211
QRDSL
216
LWDSL
221
GSQTS
226
FQWTQ
231
EQPLS
236
WFSGL
241
LGSSS
246
GVPEA
251
SEPRP
256
GEQEP
261
IFRKR
266
EFNKE
271
IKSLL
276
SQLES
281
LDLPG
286
YCPLR
291
EPHRT
296
LNFLA
301
DHRLF
306
PALQS
311
VVSQA
316
VDKLR
321
GAHCR
326
DGRPL
331
FPTSL
336
EPTSD
341
LPPLG
346
SEPAK
351
PTNGG
356
QPYAS
361
PRPTV
366
SSPKM
371
LQRKR
376
KDRGG
381
SPSMS
386
SAQVA
391
TRFKL
396
KSPCS
401
SSRFT
406
KKKPL
411
PSISS
416
KSSMS
421
HFSNR
426
LYEEL
431
ADFLT
436
QQAAS
441
LVIRK
446
YEFEK
451
DLSKQ
456
LGFFS
461
FPITH
466
VLRDL
471
SLGLK
476
KVKGS
481
RIHLS
486
SETHR
491
SCLLR
496
KLEES
501
KRARQ
506
ASRLS
511
TSHCS
516
TETPS
521
VQQEP
526
ATHTA
531
QDQAT
536
EPCRS
541
LYTNL
546
PASRQ
551
LSPLE
556
PKLYM
561
SACTG
566
MGSSP
571
PKSKD
576
MDNEG
581
RDKAE
586
IEDED
591
EDEFK
596
DEDQD
601
EDKDE
606
DGV
611
Mutation Information
DNA mutation:
None
Peptide Range:
425 ~ 449
Mut AA position:
437 (13 in Wild Type peptide)
Alignment
Wild Type:
"SHFSNRLYEELADFLTQQAASLVIR
||||||||||||.||||||||||||
Mutant:
SHFSNRLYEELANFLTQQAASLVIR"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) CCDC116
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay