Immunogenicity 1335

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
CRISP3
Transcript ID
ENST00000423399
HLA INFO
C*16:01
TCR INFO

No TCR info found!

T cell Tumor cell C*16:01
sequence
Full length protein sequence (155 aa)
MTSLK
1
CGENL
6
YMSSA
11
SSSWS
16
QAIQS
21
WFDEY
26
NDFDF
31
GVGPK
36
TPNAV
41
VGHYT
46
QVVWY
51
SSYLV
56
GCGNA
61
YCPNQ
66
KVLKY
71
YYVCQ
76
YCPAG
81
NWANR
86
LYVPY
91
EQGAP
96
CASCP
101
DNCDD
106
GLCTN
111
GCKYE
116
DLYSN
121
CKSLK
126
LTLTC
131
KHQLV
136
RDSCK
141
ASCNC
146
SNSIY
151
Mutation Information
DNA mutation:
None
Peptide Range:
67 ~ 91
Mut AA position:
79 (13 in Wild Type peptide)
Alignment
Wild Type:
"CPNQKVLKYYYVCQYCPAGNWANRL
||||||||||||.||||||||||||
Mutant:
CPNQKVLKYYYVWQYCPAGNWANRL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CRISP3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay