Immunogenicity 13359
Sample ID
3926
Response
Negative
Tumor Type
Melanoma
Gene Symbol
SHROOM3
Transcript ID
uc011cbx.2
HLA INFO
B*08:01
TCR INFO
No TCR info found!
Full length protein sequence (1996 aa)
MMRTT
1
EDFHK
6
PSATL
11
NSNTA
16
TKGRY
21
IYLEA
26
FLEGG
31
APWGF
36
TLKGG
41
LEHGE
46
PLIIS
51
KVEEG
56
GKADT
61
LSSKL
66
QAGDE
71
VVHIN
76
EVTLS
81
SSRKE
86
AVSLV
91
KGSYK
96
TLRLV
101
VRRDV
106
CTDPG
111
HADTG
116
ASNFV
121
SPEHL
126
TSGPQ
131
HRKAA
136
WSGGV
141
KLRLK
146
HRRSE
151
PAGRP
156
HSWHT
161
TKSGE
166
KQPDA
171
SMMQI
176
SQGMI
181
GPPWH
186
QSYHS
191
SSSTS
196
DLSNY
201
DHAYL
206
RRSPD
211
QCSSQ
216
GSMES
221
LEPSG
226
AYPPC
231
HLSPA
236
KSTGS
241
IDQLS
246
HFHNK
251
RDSAY
256
SSFST
261
SSSIL
266
EYPHP
271
GISGR
276
ERSGS
281
MDNTS
286
ARGGL
291
LEGMR
296
QADIR
301
YVKTV
306
YDTRR
311
GVSAE
316
YEVNS
321
SALLL
326
QGREA
331
RASAN
336
GQGYD
341
KWSNI
346
PRGKG
351
VPPPS
356
WSQQC
361
PSSLE
366
TATDN
371
LPPKV
376
GAPLP
381
PARSD
386
SYAAF
391
RHRER
396
PSSWS
401
SLDQK
406
RLCRP
411
QANSL
416
GSLKS
421
PFIEE
426
QLHTV
431
LEKSP
436
ENSPP
441
VKPKH
446
NYTQK
451
AQPGQ
456
PLLPT
461
SIYPV
466
PSLEP
471
HFAQV
476
PQPSV
481
SSNGM
486
LYPAL
491
AKESG
496
YIAPQ
501
GACNK
506
MATID
511
ENGNQ
516
NGSGR
521
PGFAF
526
CQPLE
531
HDLLS
536
PVEKK
541
PEATA
546
KYVPS
551
KVHFC
556
SVPEN
561
EEDAS
566
LKRHL
571
TPPQG
576
NSPHS
581
NERKS
586
THSNK
591
PSSHP
596
HSLKC
601
PQAQA
606
WQAGE
611
DKRSS
616
RLSEP
621
WEGDF
626
QEDHN
631
ANLWR
636
RLERE
641
GLGQS
646
LSGNF
651
GKTKS
656
AFSSL
661
QNIPE
666
SLRRH
671
SSLEL
676
GRGTQ
681
EGYPG
686
GRPTC
691
AVNTK
696
AEDPG
701
RKAAP
706
DLGSH
711
LDRQV
716
SYPRP
721
EGRTG
726
ASASF
731
NSTDP
736
SPEEP
741
PAPSH
746
PHTSS
751
LGRRG
756
PGPGS
761
ASALQ
766
GFQYG
771
KPHCS
776
VLEKV
781
SKFEQ
786
REQGS
791
QRPSV
796
GGSGF
801
GHNYR
806
PHRTV
811
STSST
816
SGNDF
821
EETKA
826
HIRFS
831
ESAEP
836
LGNGE
841
QHFKN
846
GELKL
851
EEASR
856
QPCGQ
861
QLSGG
866
ASDSG
871
RGPQR
876
PDARL
881
LRSQS
886
TFQLS
891
SEPER
896
EPEWR
901
DRPGS
906
PESPL
911
LDAPF
916
SRAYR
921
NSIKD
926
AQSRV
931
LGATS
936
FRRRD
941
LELGA
946
PVASR
951
SWRPR
956
PSSAH
961
VGLRS
966
PEASA
971
SASPH
976
TPRER
981
HSVTP
986
AEGDL
991
ARPVP
996
PAARR
1001
GARRR
1006
LTPEQ
1011
KKRSY
1016
SEPEK
1021
MNEVG
1026
IVEEA
1031
EPAPL
1036
GPQRN
1041
GMRFP
1046
ESSVA
1051
DRRRL
1056
FERDG
1061
KACST
1066
LSLSG
1071
PELKQ
1076
FQQSA
1081
LADYI
1086
QRKTG
1091
KRPTS
1096
AAGCS
1101
LQEPG
1106
PLRER
1111
AQSAY
1116
LQPGP
1121
AALEG
1126
SGLAS
1131
ASSLS
1136
SLREP
1141
SLQPR
1146
REATL
1151
LPATV
1156
AETQQ
1161
APRDR
1166
SSSFA
1171
GGRRL
1176
GERRR
1181
GDLLS
1186
GANGG
1191
TRGTQ
1196
RGDET
1201
PREPS
1206
SWGAR
1211
AGKSM
1216
SAEDL
1221
LERSD
1226
VLAGP
1231
VHVRS
1236
RSSPA
1241
TADKR
1246
QDVLL
1251
GQDSG
1256
FGLVK
1261
DPCYL
1266
AGPGS
1271
RSLSC
1276
SERGQ
1281
EEMLP
1286
LFHHL
1291
TPRWG
1296
GSGCK
1301
AIGDS
1306
SVPSE
1311
CPGTL
1316
DHQRQ
1321
ASRTP
1326
CPRPP
1331
LAGTQ
1336
GLVTD
1341
TRAAP
1346
LTPIG
1351
TPLPS
1356
AIPSG
1361
YCSQD
1366
GQTGR
1371
QPLPP
1376
YTPAM
1381
MHRSN
1386
GHTLT
1391
QPPGP
1396
RGCEG
1401
DGPEH
1406
GVEEG
1411
TRKRV
1416
SLPQW
1421
PPPSR
1426
AKWAH
1431
AARED
1436
SLPEE
1441
SSAPD
1446
FANLK
1451
HYQKQ
1456
QSLPS
1461
LCSTS
1466
DPDTP
1471
LGAPS
1476
TPGRI
1481
SLRIS
1486
ESVLR
1491
DSPPP
1496
HEDYE
1501
DEVFV
1506
RDPHP
1511
KATSS
1516
PTFEP
1521
LPPPP
1526
PPPPS
1531
QETPV
1536
YSMDD
1541
FPPPP
1546
PHTVC
1551
EAQLD
1556
SEDPE
1561
GPRPS
1566
FNKLS
1571
KVTIA
1576
RERHM
1581
PGAAH
1586
VVGSQ
1591
TLASR
1596
LQTSI
1601
KGSEA
1606
ESTPP
1611
SFMSV
1616
HAQLA
1621
GSLGG
1626
QPAPI
1631
QTQSL
1636
SHDPV
1641
SGTQG
1646
LEKKV
1651
SPDPQ
1656
KSSED
1661
IRTEA
1666
LAKEI
1671
VHQDK
1676
SLADI
1681
LDPDS
1686
RLKTT
1691
MDLME
1696
GLFPR
1701
DVNLL
1706
KENSV
1711
KRKAI
1716
QRTVS
1721
SSGCE
1726
GKRNE
1731
DKEAV
1736
SMLVN
1741
CPAYY
1746
SVSAP
1751
KAELL
1756
NKIKE
1761
MPAEV
1766
NEEEE
1771
QADVN
1776
EKKAE
1781
LIGSL
1786
THKLE
1791
TLQEA
1796
KGSLL
1801
TDIKL
1806
NNALG
1811
EEVEA
1816
LISEL
1821
CKPNE
1826
FDKYR
1831
MFIGD
1836
LDKVV
1841
NLLLS
1846
LSGRL
1851
ARVEN
1856
VLSGL
1861
GEDAS
1866
NEERS
1871
SLYEK
1876
RKILA
1881
GQHED
1886
ARELK
1891
ENLDR
1896
RERVV
1901
LGILA
1906
NYLSE
1911
EQLQD
1916
YQHFV
1921
KMKST
1926
LLIEQ
1931
RKLDD
1936
KIKLG
1941
QEQVK
1946
CLLES
1951
LPSDF
1956
IPKAG
1961
ALALP
1966
PNLTS
1971
EPIPA
1976
GGCTF
1981
SGIFP
1986
TLTSP
1991
L
1996
Mutation Information
DNA mutation:
None
Peptide Range:
1638 ~ 1662
Mut AA position:
1650 (13 in Wild Type peptide)
Alignment
Wild Type:
"QSLSHDPVSGTQGLEKKVSPDPQKS
||||||||||||.||||||||||||
Mutant:
QSLSHDPVSGTQSLEKKVSPDPQKS"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) SHROOM3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay