Immunogenicity 13507
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
PCDHAC1
Transcript ID
uc003lih.2
HLA INFO
A*24:02
TCR INFO
No TCR info found!
Full length protein sequence (963 aa)
MVGCG
1
VAVLC
6
LWVSC
11
GAAAG
16
QLEYS
21
VPEET
26
ERGVA
31
VGNLS
36
ADLRL
41
PAAAM
46
SSRNF
51
RFLSS
56
HRELY
61
FGVDL
66
PSGNL
71
VVREP
76
ADREQ
81
LCRAK
86
AACVL
91
TYDLV
96
LEDPL
101
ELHKI
106
RIHVL
111
DTNDN
116
SPLFP
121
AGDVQ
126
LHIPE
131
FLTPG
136
ARFTL
141
PNAQD
146
DDEGS
151
NGILS
156
YSLSP
161
SQHFR
166
LDMGS
171
RVDGS
176
EYPEL
181
VLEKA
186
LDREQ
191
RATHL
196
LVLTA
201
RDGGL
206
PARSG
211
DAQVT
216
IIVVD
221
TNDNA
226
PVFER
231
SVYRT
236
KVPET
241
APNGT
246
VLFRV
251
QALDP
256
DEGSN
261
GEVQY
266
SLSNS
271
TQAEL
276
RHRFH
281
VHPKS
286
GEVQV
291
AASLG
296
PPETL
301
LEAYI
306
EARDE
311
GVFGL
316
ASTAK
321
LLVEV
326
TDVND
331
HAPEL
336
DFLTL
341
SNPVP
346
EDAAP
351
GTVIA
356
LFSVK
361
DEDLD
366
SNGRV
371
ICGMS
376
SAGPF
381
QLTAS
386
FDNYY
391
SLLID
396
GPLDR
401
EQISE
406
YQVLI
411
TASDS
416
GSPPL
421
STRRT
426
ITVSV
431
ADVND
436
NTPNF
441
PQPQQ
446
ELFVA
451
ENNGP
456
GASLG
461
RVFAQ
466
DPDLG
471
KNGLV
476
SYELL
481
DVISE
486
GPSAS
491
SLLAV
496
ESSSG
501
AITAK
506
TSFDF
511
EQLRG
516
FHFQV
521
EGRDG
526
GIPPR
531
SATVT
536
INLFV
541
VDRND
546
NYPVI
551
LFPLP
556
RNGSV
561
PVEIV
566
PRSAR
571
TGHLV
576
TKVVA
581
EDADS
586
GSNAW
591
LSYHI
596
SRASD
601
SSLFR
606
ISANI
611
GELRT
616
ARLVL
621
PTDAV
626
KQRVV
631
VVVRD
636
HGDPP
641
LSSSV
646
TLGVL
651
LSNSV
656
PQLLP
661
DFEDV
666
WEPGG
671
QLSAQ
676
NLYLV
681
IALAC
686
ISFLF
691
LGCLL
696
FFVCT
701
KLHQS
706
PGCCA
711
QSCCR
716
STEDL
721
RYGSK
726
MVSNP
731
CMTSA
736
TIDVT
741
TVERL
746
SQTYL
751
YRASL
756
GLGSD
761
NNSLL
766
LRGEY
771
NAADL
776
RNLAT
781
GVGLN
786
LPISC
791
IQIRN
796
RKGDH
801
ANVNA
806
MPRQP
811
NPDWR
816
YSASL
821
RAGMH
826
SSVHL
831
EEAGI
836
LRAGP
841
GGPDQ
846
QWPTV
851
SSATP
856
EPEAG
861
EVSPP
866
VGAGV
871
NSNSW
876
TFKYG
881
PGNPK
886
QSGPG
891
ELPDK
896
FIIPG
901
SPAII
906
SIRQE
911
PTNSQ
916
IDKSD
921
FITFG
926
KKEET
931
KKKKK
936
KKKGN
941
KTQEK
946
KEKGN
951
STTDN
956
SDQ
961
Mutation Information
DNA mutation:
None
Peptide Range:
423 ~ 447
Mut AA position:
435 (13 in Wild Type peptide)
Alignment
Wild Type:
"PPLSTRRTITVSVADVNDNTPNFPQ
||||||||||||.||||||||||||
Mutant:
PPLSTRRTITVSAADVNDNTPNFPQ"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) PCDHAC1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay