Immunogenicity 13527
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
PCDHGB6
Transcript ID
uc003lkj.2
HLA INFO
B*38:01
TCR INFO
No TCR info found!
Full length protein sequence (930 aa)
MGGSC
1
AQRRR
6
AGPRQ
11
VLFPL
16
LLPLF
21
YPTLS
26
EPIRY
31
SIPEE
36
LAKGS
41
VVGNL
46
AKDLG
51
LSVLD
56
VSARK
61
LRVSA
66
EKLHF
71
SVDAE
76
SGDLL
81
VKNRI
86
DREQI
91
CKERR
96
RCELQ
101
LEAVV
106
ENPLN
111
IFHVI
116
VVIED
121
VNDHA
126
PQFDK
131
KEIHL
136
EIFES
141
ASAGT
146
RLSLD
151
PATDP
156
DININ
161
SIKDY
166
KINSN
171
PYFSL
176
MVRVN
181
SDGGK
186
YPELS
191
LEKLL
196
DREEQ
201
RSHSL
206
ILTAL
211
DGGDP
216
PRSAT
221
AHIEI
226
SVKDT
231
NDNPP
236
VFSRD
241
EYRIS
246
LSENL
251
PPGSP
256
VLQVT
261
ATDQD
266
EGVNA
271
EINYY
276
FRSTA
281
QSTKH
286
MFSLD
291
EKTGM
296
IKNNQ
301
SFDFE
306
DVERY
311
TMEVE
316
AKDGG
321
GLSTQ
326
CKVII
331
EILDE
336
NDNSP
341
EIIIT
346
SLSDQ
351
ILENS
356
PPGMV
361
VALFK
366
TRDLD
371
FGGNG
376
EVRCN
381
IETDI
386
PFKIY
391
SSSNN
396
YYKLV
401
TDGAL
406
DREQT
411
PEYNV
416
TIVAT
421
DRGKP
426
PLSSS
431
RSITL
436
YVADI
441
NDNAP
446
VFDQT
451
SYVVH
456
VAENN
461
PPGAS
466
IAQVS
471
ASDPD
476
LGLNG
481
HISYS
486
IVASD
491
LEPLA
496
VSSYV
501
SVSAQ
506
SGVVF
511
AQRAF
516
DHEQL
521
RAFAL
526
TLQAR
531
DHGSP
536
TLSAN
541
VSLRV
546
LVGDR
551
NDNAP
556
RVLYP
561
ALGPD
566
GSAFF
571
DMVPR
576
SAEPG
581
YLVTK
586
VVAVD
591
ADSGH
596
NAWLS
601
YHVLQ
606
ASEPG
611
LFSLG
616
LRTGE
621
VRTAR
626
ALGDR
631
DAARQ
636
RLLVA
641
VRDGG
646
QPPLS
651
ATATL
656
HLVFA
661
DNLQE
666
ILPDL
671
SDRPV
676
LSDPQ
681
AELQF
686
YLVVA
691
LALIS
696
VLFLL
701
AVILA
706
IALRL
711
RRSLS
716
PATWD
721
CFHPG
726
LCVKS
731
GPVVP
736
PNYSE
741
GTLPY
746
SYNLC
751
IAHTG
756
TKEFN
761
FLKCS
766
VPLHS
771
NEDMV
776
CSVSP
781
GALIP
786
PHGGE
791
DLTSH
796
PETLT
801
SQAPP
806
NTDWR
811
FSQAQ
816
RPGTS
821
GSQNG
826
DDTGT
831
WPNNQ
836
FDTEM
841
LQAMI
846
LASAS
851
EAADG
856
SSTLG
861
GGAGT
866
MGLSA
871
RYGPQ
876
FTLQH
881
VPDYR
886
QNVYI
891
PGSNA
896
TLTNA
901
AGKRD
906
GKAPA
911
GGNGN
916
KKKSG
921
KKEKK
926
Mutation Information
DNA mutation:
None
Peptide Range:
326 ~ 350
Mut AA position:
338 (13 in Wild Type peptide)
Alignment
Wild Type:
"GLSTQCKVIIEILDENDNSPEIIIT
||||||||||||.||||||||||||
Mutant:
GLSTQCKVIIEIFDENDNSPEIIIT"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) PCDHGB6
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay