Immunogenicity 13644

summary
Sample ID
3998
Response
Negative
Tumor Type
Melanoma
Gene Symbol
FAM20C
Transcript ID
uc003sip.3
HLA INFO
B*15:01
TCR INFO

No TCR info found!

T cell Tumor cell B*15:01
sequence
Full length protein sequence (584 aa)
MKMML
1
VRRFR
6
VLILM
11
VFLVA
16
CALHI
21
ALDLL
26
PRLER
31
RGARP
36
SGEPG
41
CSCAQ
46
PAAEV
51
AAPGW
56
AQVRG
61
RPGEP
66
PAASS
71
AAGDA
76
GWPNK
81
HTLRI
86
LQDFS
91
SDPSS
96
NLSSH
101
SLEKL
106
PPAAE
111
PAERA
116
LRGRD
121
PGALR
126
PHDPA
131
HRPLL
136
RDPGP
141
RRSES
146
PPGPG
151
GDASL
156
LARLF
161
EHPLY
166
RVAVP
171
PLTEE
176
DVLFN
181
VNSDT
186
RLSPK
191
AAENP
196
DWPHA
201
GAEGA
206
EFLSP
211
GEAAV
216
DSYPN
221
WLKFH
226
IGINR
231
YELYS
236
RHNPA
241
IEALL
246
HDLSS
251
QRITS
256
VAMKS
261
GGTQL
266
KLIMT
271
FQNYG
276
QALFK
281
PMKQT
286
REQET
291
PPDFF
296
YFSDY
301
ERHNA
306
EIAAF
311
HLDRI
316
LDFRR
321
VPPVA
326
GRMVN
331
MTKEI
336
RDVTR
341
DKKLW
346
RTFFI
351
SPANN
356
ICFYG
361
ECSYY
366
CSTEH
371
ALCGK
376
PDQIE
381
GSLAA
386
FLPDL
391
SLAKR
396
KTWRN
401
PWRRS
406
YHKRK
411
KAEWE
416
VDPDY
421
CEEVK
426
QTPPY
431
DSSHR
436
ILDVM
441
DMTIF
446
DFLMG
451
NMDRH
456
HYETF
461
EKFGN
466
ETFII
471
HLDNG
476
RGFGK
481
YSHDE
486
LSILV
491
PLQQC
496
CRIRK
501
STYLR
506
LQLLA
511
KEEYK
516
LSLLM
521
AESLR
526
GDQVA
531
PVLYQ
536
PHLEA
541
LDRRL
546
RVVLK
551
AVRDC
556
VERNG
561
LHSVV
566
DDDLD
571
TEHRA
576
ASAR
581
Mutation Information
DNA mutation:
None
Peptide Range:
212 ~ 236
Mut AA position:
224 (13 in Wild Type peptide)
Alignment
Wild Type:
"FLSPGEAAVDSYPNWLKFHIGINRY
||||||||||||.||||||||||||
Mutant:
FLSPGEAAVDSYLNWLKFHIGINRY"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

PBMCs

APC Type

COS7

Assay

IFNg ELISPOT assay