Immunogenicity 13652
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
COL28A1
Transcript ID
uc003src.1
HLA INFO
A*02:01
TCR INFO
No TCR info found!
Full length protein sequence (1125 aa)
MWNRY
1
FVFYL
6
LLLSA
11
FTSQT
16
VSGQR
21
KKGPK
26
SNLLA
31
RKSDV
36
QGSIC
41
FIDIV
46
FIVDS
51
SESSK
56
IALFD
61
KQKDF
66
VDSLS
71
DKIFQ
76
LTPGR
81
SLEYD
86
IKLAA
91
LQFSS
96
SVQID
101
PPFSS
106
WKDLQ
111
TFKQK
116
VKSMN
121
LIGQG
126
TFSYY
131
AISNA
136
TRLLK
141
REGRK
146
DGVKV
151
VLLMT
156
DGIDH
161
PKNPD
166
VQSIS
171
EDARI
176
SGISF
181
ITIAL
186
STVVN
191
EAKLR
196
LISGD
201
SSSEP
206
TLLLS
211
DPTLV
216
DKIQD
221
RLDIL
226
FEKKC
231
ERKIC
236
ECEKG
241
DPGDP
246
GPPGT
251
HGNPG
256
IKGER
261
GPKGN
266
PGNAQ
271
KGEAG
276
ERGPG
281
GIPGY
286
KGDKG
291
ERGEC
296
GKPGI
301
KGDKG
306
SPGPY
311
GPKGP
316
RGIQG
321
ITGPP
326
GDPGP
331
KGFQG
336
NKGEP
341
GPPGP
346
YGSPG
351
APGIG
356
QQGIK
361
GERGQ
366
EGRPG
371
APGPI
376
GVGEP
381
GQPGP
386
RGPEG
391
VPGER
396
GLPGE
401
GFPGP
406
KGEKG
411
SEGPT
416
GPQGL
421
QGLSI
426
KGEKG
431
DIGPV
436
GPQGP
441
MGIPG
446
IGSQG
451
EQGIQ
456
GPIGP
461
PGPQG
466
PAGQG
471
LPGSK
476
GEVGQ
481
MGPTG
486
PRGPV
491
GIGVQ
496
GPKGE
501
PGSIG
506
LPGQP
511
GVPGE
516
DGAAG
521
KKGEA
526
GLPGA
531
RGPEG
536
PPGKG
541
QPGPK
546
GDEGK
551
KGSKG
556
NQGQR
561
GLPGP
566
EGPKG
571
EPGIM
576
GPFGM
581
PGTSI
586
PGPPG
591
PKGDR
596
GGPGI
601
PGFKG
606
EPGLS
611
IRGPK
616
GVQGP
621
RGPVG
626
APGLK
631
GDGYP
636
GVPGP
641
RGLPG
646
PPGPM
651
GLRGV
656
GDTGA
661
KGEPG
666
VRGPP
671
GPSGP
676
RGVGT
681
QGPKG
686
DTGQK
691
GLPGP
696
PGPPG
701
YGSQG
706
IKGEQ
711
GPQGF
716
PGPKG
721
TMGHG
726
LPGQK
731
GEHGE
736
RGDVG
741
KKGDK
746
GEIGE
751
PGSPG
756
KQGLQ
761
GPKGD
766
LGLTK
771
EEIIK
776
LITEI
781
CGCGP
786
KCKET
791
PLELV
796
FVIDS
801
SESVG
806
PENFQ
811
IIKNF
816
VKTMA
821
DRVAL
826
DLATA
831
RIGII
836
NYSHK
841
VEKVA
846
NLKQF
851
SSKDD
856
FKLAV
861
DNMQY
866
LGEGT
871
YTATA
876
LQAAN
881
DMFED
886
ARPGV
891
KKVAL
896
VITDG
901
QTDSR
906
DKEKL
911
TEVVK
916
NASDT
921
NVEIF
926
VIGVV
931
KKNDP
936
NFEIF
941
HKEMN
946
LIATD
951
PEHVY
956
QFDDF
961
FTLQD
966
TLKQK
971
LFQKI
976
CEDFD
981
SYLVQ
986
IFGSS
991
SPQPG
996
FGMSG
1001
EELSE
1006
STPEP
1011
QKEIS
1016
ESLSV
1021
TRDQD
1026
EDDKA
1031
PEPTW
1036
ADDLP
1041
ATTSS
1046
EATTT
1051
PRPLL
1056
STPVD
1061
GAEDP
1066
RCLEA
1071
LKPGN
1076
CGEYV
1081
VRWYY
1086
DKQVN
1091
SCARF
1096
WFSGC
1101
NGSGN
1106
RFNSE
1111
KECQE
1116
TCIQG
1121
Mutation Information
DNA mutation:
None
Peptide Range:
247 ~ 271
Mut AA position:
259 (13 in Wild Type peptide)
Alignment
Wild Type:
"PGDPGPPGTHGNPGIKGERGPKGNP
||||||||||||.||||||||||||
Mutant:
PGDPGPPGTHGNSGIKGERGPKGNP"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) COL28A1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay