Immunogenicity 137
Sample ID
4196
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
USP42
Transcript ID
uc011jwr.1
HLA INFO
A*02:01
TCR INFO
No TCR info found!
Full length protein sequence (1327 aa)
MTIVD
1
KASES
6
SDPSA
11
YQNQP
16
GSSEA
21
VSPGD
26
MDAGS
31
ASWGA
36
VSSLN
41
DVSNH
46
TLSLG
51
PVPGA
56
VVYSS
61
SSVPD
66
KSKPS
71
PQKDQ
76
ALGDG
81
IAPPQ
86
KVLFP
91
SEKIC
96
LKWQQ
101
THRVG
106
AGLQN
111
LGNTC
116
FANAA
121
LQCLT
126
YTPPL
131
ANYML
136
SHEHS
141
KTCHA
146
EGFCM
151
MCTMQ
156
AHITQ
161
ALSNP
166
GDVIK
171
PMFVI
176
NEMRR
181
IARHF
186
RFGNQ
191
EDAHE
196
FLQYT
201
VDAMQ
206
KACLN
211
GSNKL
216
DRHTQ
221
ATTLV
226
CQIFG
231
GYLRS
236
RVKCL
241
NCKGV
246
SDTFD
251
PYLDI
256
TLEIK
261
AAQSV
266
NKALE
271
QFVKP
276
EQLDG
281
ENSYK
286
CSKCK
291
KMVPA
296
SKRFT
301
IHRSS
306
NVLTL
311
SLKRF
316
ANFTG
321
GKIAK
326
DVKYP
331
EYLDI
336
RPYMS
341
QPNGE
346
PIVYV
351
LYAVL
356
VHTGF
361
NCHAG
366
HYFCY
371
IKASN
376
GLWYQ
381
MNDSI
386
VSTSD
391
IRSVL
396
SQQAY
401
VLFYI
406
RSHDV
411
KNGGE
416
LTHPT
421
HSPGQ
426
SSPRP
431
VISQR
436
VVTNK
441
QAAPG
446
FIGPQ
451
LPSHM
456
IKNPP
461
HLNGT
466
GPLKD
471
TPSSS
476
MSSPN
481
GNSSV
486
NRASP
491
VNASA
496
SVQNW
501
SVNRS
506
SVIPE
511
HPKKQ
516
KITIS
521
IHNKL
526
PVRQC
531
QSQPN
536
LHSNS
541
LENPT
546
KPVPS
551
STITN
556
SAVQS
561
TSNAS
566
TMSVS
571
SKVTK
576
PIPRS
581
ESCSQ
586
PVMNG
591
KSKLN
596
SSVLV
601
PYGAE
606
SSEDS
611
DEESK
616
GLGKE
621
NGIGT
626
IVSSH
631
SPGQD
636
AEDEE
641
ATPHE
646
LQEPM
651
TLNGA
656
NSADS
661
DSDPK
666
ENGLA
671
PDGAS
676
CQGQP
681
ALHSE
686
NPFAK
691
ANGLP
696
GKLMP
701
APLLS
706
LPEDK
711
ILETF
716
RLSNK
721
LKGST
726
DEMSA
731
PGAER
736
GPPED
741
RDAEP
746
QPGSP
751
AAESL
756
EEPDA
761
AAGLS
766
STKKA
771
PPPRD
776
PGTPA
781
TKEGA
786
WEAMA
791
VAPEE
796
PPPSA
801
GEDIV
806
GDTAP
811
PDLCD
816
PGSLT
821
GDASP
826
LSQDA
831
KGMIA
836
EGPRD
841
SALAE
846
APEGL
851
SPAPP
856
ARSEE
861
PCEQP
866
LLVHP
871
SGDHA
876
RDAQD
881
PSQSL
886
GAPEA
891
AERPP
896
APVLD
901
MAPAG
906
HPEGD
911
AEPSP
916
GERVE
921
DAAAP
926
KAPGP
931
SPAKE
936
KIGSL
941
RKVDR
946
GHYRS
951
RRERS
956
SSGEP
961
ARESR
966
SKTEG
971
HRHRR
976
RRTCP
981
RERDR
986
QDRHA
991
PEHHP
996
GHGDR
1001
LSPGE
1006
RRSLG
1011
RCSHH
1016
HSRHR
1021
SGVEL
1026
DWVRH
1031
HYTEG
1036
ERGWG
1041
REKFY
1046
PDRPR
1051
WDRCR
1056
YYHDR
1061
YALYA
1066
ARDWK
1071
PFHGG
1076
REHER
1081
AGLHE
1086
RPHKD
1091
HNRGR
1096
RGCEP
1101
ARERE
1106
RHRPS
1111
SPRAG
1116
APHAL
1121
APHPD
1126
RFSHD
1131
RTALV
1136
AGDNC
1141
NLSDR
1146
FHEHE
1151
NGKSR
1156
KRRHD
1161
SVENS
1166
DSHVE
1171
KKARR
1176
SEQKD
1181
PLEEP
1186
KAKKH
1191
KKSKK
1196
KKKSK
1201
DKHRD
1206
RDSRH
1211
QQDSD
1216
LSAAC
1221
SDADL
1226
HRHKK
1231
KKKKK
1236
KRHSR
1241
KSEDF
1246
VKDSE
1251
LHLPR
1256
VTSLE
1261
TVAQF
1266
RRAQG
1271
GFPLS
1276
GGPPL
1281
EGVGP
1286
FREKT
1291
KHLRM
1296
ESRDD
1301
RCRLF
1306
EYGQD
1311
STRST
1316
EAIPS
1321
PA
1326
Mutation Information
DNA mutation:
c.C1247T
Peptide Range:
559 ~ 583
Mut AA position:
None (None in Wild Type peptide)
Alignment
Wild Type:
"TNSAVQSTSNASTMSVSSKVTKPIP
||||||||||||.||||||||||||
Mutant:
TNSAVQSTSNASMMSVSSKVTKPIP"
Cancer Immunol Res, 2019
Immunologic Recognition of a Shared p53 Mutated Neoantigen in a Patient with Metastatic Colorectal CancerGene Name (from Reference) USP42
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
TNSAVQSTSNASMMSVSSKVTKPIP
Antigen
Type
TMG
T-cell
Source
TILs
APC
Type
DSs
Assay
ELISPOT