Immunogenicity 1384
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RTN2
Transcript ID
ENST00000245923
HLA INFO
A*01:01
TCR INFO
No TCR info found!
Full length protein sequence (545 aa)
MGQVL
1
PVFAH
6
CKEAP
11
STASS
16
TPDST
21
EGGND
26
DSDFR
31
ELHTA
36
REFSE
41
EDEEE
46
TTSQD
51
WGTPR
56
ELTFS
61
YIAFD
66
GVVGS
71
GGRRD
76
STARR
81
PRPQG
86
RSVSE
91
PRDQH
96
PQPSL
101
GDSLE
106
SIPSL
111
SQSPE
116
PGRRG
121
DPDTA
126
PPSER
131
PLEDL
136
RLRLD
141
HLGWV
146
ARGTG
151
SGEDS
156
STSSS
161
TPLED
166
EEPQE
171
PNRLE
176
TGEAG
181
EELDL
186
RLRLA
191
QPSSP
196
EVLTP
201
QLSPG
206
SGTPQ
211
AGTPS
216
PSRSR
221
DSNSG
226
PEEPL
231
LEEEE
236
KQWGP
241
LEREP
246
VRGQC
251
LDSTD
256
QLEFT
261
VEPRL
266
LGTAM
271
EWLKT
276
SLLLA
281
VYKTV
286
PILEL
291
SPPLW
296
TAIGW
301
VQRGP
306
TPPTP
311
VLRVL
316
LKWAK
321
SPRSS
326
GVPSL
331
SLGAD
336
MGSKV
341
ADLLY
346
WKDTR
351
TSGVV
356
FTGLM
361
VSLLC
366
LLHFS
371
IVSVA
376
AHLAL
381
LLLCG
386
TISLR
391
VYRKV
396
LQAVH
401
RGDGA
406
NPFQA
411
YLDVD
416
LTLTR
421
EQTER
426
LSHQI
431
TSRVV
436
SAATQ
441
LRHFF
446
LVEDL
451
VDSLK
456
LALLF
461
YILTF
466
VGAIF
471
NGLTL
476
LILGV
481
IGLFT
486
IPLLY
491
RQHQA
496
QIDQY
501
VGLVT
506
NQLSH
511
IKAKI
516
RAKIP
521
GTGAL
526
ASAAA
531
AVSGS
536
KAKAE
541
Mutation Information
DNA mutation:
None
Peptide Range:
141 ~ 165
Mut AA position:
153 (13 in Wild Type peptide)
Alignment
Wild Type:
"RLRLDHLGWVARGTGSGEDSSTSSS
||||||||||||.||||||||||||
Mutant:
RLRLDHLGWVARETGSGEDSSTSSS"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RTN2
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay