Immunogenicity 139

summary
Sample ID
4196
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
VPS37A
Transcript ID
uc003wxk.3
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (397 aa)
MSWLF
1
PLTKS
6
ASSSA
11
AGSPG
16
GLTSL
21
QQQKQ
26
RLIES
31
LRNSH
36
SSIAE
41
IQKDV
46
EYRLP
51
FTINN
56
LTINI
61
NILLP
66
PQFPQ
71
EKPVI
76
SVYPP
81
IRHHL
86
MDKQG
91
VYVTS
96
PLVNN
101
FTMHS
106
DLGKI
111
IQSLL
116
DEFWK
121
NPPVL
126
APTST
131
AFPYL
136
YSNPS
141
GMSPY
146
ASQGF
151
PFLPP
156
YPPQE
161
ANRSI
166
TSLSV
171
ADTVS
176
SSTTS
181
HTTAK
186
PAAPS
191
FGVLS
196
NLPLP
201
IPTVD
206
ASIPT
211
SQNGF
216
GYKMP
221
DVPDA
226
FPELS
231
ELSVS
236
QLTDM
241
NEQEE
246
VLLEQ
251
FLTLP
256
QLKQI
261
ITDKD
266
DLVKS
271
IEELA
276
RKNLL
281
LEPSL
286
EAKRQ
291
TVLDK
296
YELLT
301
QMKST
306
FEKKM
311
QRQHE
316
LSESC
321
SASAL
326
QARLK
331
VAAHE
336
AEEES
341
DNIAE
346
DFLEG
351
KMEID
356
DFLSS
361
FMEKR
366
TICHC
371
RRAKE
376
EKLQQ
381
AIAMH
386
SQFHA
391
PL
396
Mutation Information
DNA mutation:
c.T836C
Peptide Range:
292 ~ 316
Mut AA position:
None (None in Wild Type peptide)
Alignment
Wild Type:
"AKRQTVLDKYELLTQMKSTFEKKMQ
||||||||||||.||||||||||||
Mutant:
AKRQTVLDKYELPTQMKSTFEKKMQ"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

AKRQTVLDKYELPTQMKSTFEKKMQ

Antigen Type

TMG

T-cell Source

TILs

APC Type

DSs

Assay

ELISPOT