Immunogenicity 14033
Sample ID
3926
Response
Negative
Tumor Type
Melanoma
Gene Symbol
CDKL5
Transcript ID
uc022btn.1
HLA INFO
B*08:01
TCR INFO
No TCR info found!
Full length protein sequence (951 aa)
MNKFE
1
ILGVV
6
GEGAY
11
GVVLK
16
CRHKE
21
THEIV
26
AIKKF
31
KDSEE
36
NEEVK
41
ETTLR
46
ELKML
51
RTLKQ
56
ENIVE
61
LKEAF
66
RRRGK
71
LYLVF
76
EYVEK
81
NMLEL
86
LEEMP
91
NGVPP
96
EKVKS
101
YIYQL
106
IKAIH
111
WCHKN
116
DIVHR
121
DIKPE
126
NLLIS
131
HNDVL
136
KLCDF
141
GFARN
146
LSEGN
151
NANYT
156
EYVAT
161
RWYRS
166
PELLL
171
GAPYG
176
KSVDM
181
WSVGC
186
ILGEL
191
SDGQP
196
LFPGE
201
SEIDQ
206
LFTIQ
211
KVLGP
216
LPSEQ
221
MKLFY
226
SNPRF
231
HGLRF
236
PAVNH
241
PQSLE
246
RRYLG
251
ILNSV
256
LLDLM
261
KNLLK
266
LDPAD
271
RYLTE
276
QCLNH
281
PTFQT
286
QRLLD
291
RSPSR
296
SAKRK
301
PYHVE
306
SSTLS
311
NRNQA
316
GKSTA
321
LQSHH
326
RSNSK
331
DIQNL
336
SVGLP
341
RADEG
346
LPANE
351
SFLNG
356
NLAGA
361
SLSPL
366
HTKTY
371
QASSQ
376
PGSTS
381
KDLTN
386
NNIPH
391
LLSPK
396
EAKSK
401
TEFDF
406
NIDPK
411
PSEGP
416
GTKYL
421
KSNSR
426
SQQNR
431
HSFME
436
SSQSK
441
AGTLQ
446
PNEKQ
451
SRHSY
456
IDTIP
461
QSSRS
466
PSYRT
471
KAKSH
476
GALSD
481
SKSVS
486
NLSEA
491
RAQIA
496
EPSTS
501
RYFPS
506
SCLDL
511
NSPTS
516
PTPTR
521
HSDTR
526
TLLSP
531
SGRNN
536
RNEGT
541
LDSRR
546
TTTRH
551
SKTME
556
ELKLP
561
EHMDS
566
SHSHS
571
LSAPH
576
ESFSY
581
GLGYT
586
SPFSS
591
QQRPH
596
RHSMY
601
VTRDK
606
VRAKG
611
LDGSL
616
SIGQG
621
MAARA
626
NSLQL
631
LSPQP
636
GEQLP
641
PEMTV
646
ARSSV
651
KETSR
656
EGTSS
661
FHTRQ
666
KSEGG
671
VYHDP
676
HSDDG
681
TAPKE
686
NRHLY
691
NDPVP
696
RRVGS
701
FYRVP
706
SPRPD
711
NSFHE
716
NNVST
721
RVSSL
726
PSESS
731
SGTNH
736
SKRQP
741
AFDPW
746
KSPEN
751
ISHSE
756
QLKEK
761
EKQGF
766
FRSMK
771
KKKKK
776
SQTVP
781
NSDSP
786
DLLTL
791
QKSIH
796
SASTP
801
SSRPK
806
EWRPE
811
KISDL
816
QTQSQ
821
PLKSL
826
RKLLH
831
LSSAS
836
NHPAS
841
SDPRF
846
QPLTA
851
QQTKN
856
SFSEI
861
RIHPL
866
SQASG
871
GSSNI
876
RQEPA
881
PKGRP
886
ALQLP
891
GQMDP
896
GWHVS
901
SVTRS
906
ATEGP
911
SYSEQ
916
LGAKS
921
GPNGH
926
PYNRT
931
NRSRM
936
PNLND
941
LKETA
946
L
951
Mutation Information
DNA mutation:
None
Peptide Range:
222 ~ 246
Mut AA position:
234 (13 in Wild Type peptide)
Alignment
Wild Type:
"PSEQMKLFYSNPRFHGLRFPAVNHP
||||||||||||.||||||||||||
Mutant:
PSEQMKLFYSNPCFHGLRFPAVNHP"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) CDKL5
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay