Immunogenicity 1418

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SFXN2
Transcript ID
ENST00000459894
HLA INFO
DRB*03:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*03:01
sequence
Full length protein sequence (186 aa)
MMYPV
1
RGTEG
6
STVLC
11
VSKME
16
ADLSG
21
FNIDA
26
PRWDQ
31
RTFLG
36
RVKHF
41
LNITD
46
PRTVF
51
VSERE
56
LDWAK
61
VMVEK
66
SRMGV
71
VPPGT
76
QVEQL
81
LYAKK
86
LYDSA
91
FHPDT
96
GEKMN
101
VIGRM
106
SFQLP
111
GGMII
116
TGFML
121
QFYRT
126
MPAVI
131
FWQWV
136
NQSFN
141
ALVNY
146
TNRNA
151
ASPTS
156
VRKRR
161
PWWAA
166
GCPLP
171
LWLRL
176
TVSIS
181
P
186
Mutation Information
DNA mutation:
None
Peptide Range:
143 ~ 167
Mut AA position:
155 (13 in Wild Type peptide)
Alignment
Wild Type:
"SFNALVNYTNRNAASPTSVRKRRPW
||||||||||||.||||||||||||
Mutant:
SFNALVNYTNRNTASPTSVRKRRPW"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SFXN2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay