Immunogenicity 14276
Sample ID
3784
Response
Negative
Tumor Type
Melanoma
Gene Symbol
DDX42
Transcript ID
NM_007372
HLA INFO
A*01:01
TCR INFO
No TCR info found!
Full length protein sequence (938 aa)
MNWNK
1
GGPGT
6
KRGFG
11
FGGFA
16
ISAGK
21
KEEPK
26
LPQQS
31
HSAFG
36
ATSSS
41
SGFGK
46
SAPPQ
51
LPSFY
56
KIGSK
61
RANFD
66
EENAY
71
FEDEE
76
EDSSN
81
VDLPY
86
IPAEN
91
SPTRQ
96
QFHSK
101
PVDSD
106
SDDDP
111
LEAFM
116
AEVED
121
QAARD
126
MKRLE
131
EKDKE
136
RKNVK
141
GIRDD
146
IEEED
151
DQEAY
156
FRYMA
161
ENPTA
166
GVVQE
171
EEEDN
176
LEYDS
181
DGNPI
186
APTKK
191
IIDPL
196
PPIDH
201
SEIDY
206
PPFEK
211
NFYNE
216
HEEIT
221
NLTPQ
226
QLIDL
231
RHKLN
236
LRVSG
241
AAPPR
246
PGSSF
251
AHFGF
256
DEQLM
261
HQIRK
266
SEYTQ
271
PTPIQ
276
CQGVP
281
VALSG
286
RDMIG
291
IAKTG
296
SGKTA
301
AFIWP
306
MLIHI
311
MDQKE
316
LEPGD
321
GPIAV
326
IVCPT
331
RELCQ
336
QIHAE
341
CKRFG
346
KAYNL
351
RSVAV
356
YGGGS
361
MWEQA
366
KALQE
371
GAEIV
376
VCTPG
381
RLIDH
386
VKKKA
391
TNLQR
396
VSYLV
401
FDEAD
406
RMFDM
411
GFEYQ
416
VRSIA
421
SHVRP
426
DRQTL
431
LFSAT
436
FRKKI
441
EKLAR
446
DILID
451
PIRVV
456
QGDIG
461
EANED
466
VTQIV
471
EILHS
476
GPSKW
481
NWLTR
486
RLVEF
491
TSSGS
496
VLLFV
501
TKKAN
506
AEELA
511
NNLKQ
516
EGHNL
521
GLLHG
526
DMDQS
531
ERNKV
536
ISDFK
541
KKDIP
546
VLVAT
551
DVAAR
556
GLDIP
561
SIKTV
566
INYDV
571
ARDID
576
THTHR
581
IGRTG
586
RAGEK
591
GVAYT
596
LLTPK
601
DSNFA
606
GDLVR
611
NLEGA
616
NQHVS
621
KELLD
626
LAMQN
631
AWFRK
636
SRFKG
641
GKGKK
646
LNIGG
651
GGLGY
656
RERPG
661
LGSEN
666
MDRGN
671
NNVMS
676
NYEAY
681
KPSTG
686
AMGDR
691
LTAMK
696
AAFQS
701
QYKSH
706
FVAAS
711
LSNQK
716
AGSSA
721
AGASG
726
WTSAG
731
SLNSV
736
PTNSA
741
QQGHN
746
SPDSP
751
VTSAA
756
KGIPG
761
FGNTG
766
NISGA
771
PVTYP
776
SAGAQ
781
GVNNT
786
ASGNN
791
SREGT
796
GGSNG
801
KRERY
806
TENRG
811
SSRHS
816
HGETG
821
NRHSD
826
SPRHG
831
DGGRH
836
GDGYR
841
HPESS
846
SRHTD
851
GHRHG
856
ENRHG
861
GSAGR
866
HGENR
871
GANDG
876
RNGES
881
RKEAF
886
NRESK
891
MEPKM
896
EPKVD
901
SSKMD
906
KVDSK
911
TDKTA
916
DGFAV
921
PEPPK
926
RKKSR
931
WDS
936
Mutation Information
DNA mutation:
None
Peptide Range:
553 ~ 577
Mut AA position:
565 (13 in Wild Type peptide)
Alignment
Wild Type:
"VATDVAARGLDIPSIKTVINYDVAR
||||||||||||.||||||||||||
Mutant:
VATDVAARGLDILSIKTVINYDVAR"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) DDX42
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay