Immunogenicity 1446

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RPS6KA1
Transcript ID
ENST00000366866
HLA INFO
DQA*01:02 / DQB*06:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:02
sequence
Full length protein sequence (111 aa)
MQTPA
1
DFPRV
6
ERDLV
11
PCPRK
16
VQQQE
21
PTALP
26
LTPSW
31
GSLPC
36
CLPVC
41
LPGVR
46
PICPR
51
MRASS
56
RRSPS
61
RTTSR
66
LALRR
71
LIHPI
76
SSSSR
81
FWARD
86
PLAKS
91
SWCGK
96
SPGLT
101
VGTCM
106
L
111
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 25
Mut AA position:
13 (13 in Wild Type peptide)
Alignment
Wild Type:
"MQTPADFPRVERDLVPCPRKVQQQE
||||||||||||.||||||||||||
Mutant:
MQTPADFPRVERHLVPCPRKVQQQE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000117676

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay