Immunogenicity 1469

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
KRTAP10-9
Transcript ID
ENST00000397911
HLA INFO
DQA*05:01 / DQB*06:03
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*05:01 DQB*06:03
sequence
Full length protein sequence (292 aa)
MAAST
1
MSIRS
6
SAYSD
11
SWQVD
16
DCPES
21
CCEPP
26
CCATS
31
CCAPA
36
PCLTL
41
VCTPV
46
SRVSS
51
PCCQV
56
TCEPS
61
PCQSG
66
CTSSC
71
TPSCC
76
QQSSC
81
QPAYC
86
TSSPC
91
QQACC
96
VPVCC
101
KPVCC
106
VPVCC
111
GASSC
116
CQQSS
121
YQPAC
126
CASSS
131
CQPAC
136
CVPVC
141
CKPVC
146
CAPTC
151
SEDSY
156
SCCQQ
161
SSCQP
166
ACCTS
171
SPCQQ
176
SYCVP
181
VCCKP
186
VCCKP
191
ICCVP
196
VCSGA
201
SSLCC
206
QQSGC
211
QPACC
216
TTSCC
221
RPSSS
226
VSLLC
231
RPVCR
236
PACCV
241
PVSSC
246
CAPTS
251
SRQPS
256
YCRQA
261
SCVSL
266
LCRPV
271
CSRPA
276
CYSFS
281
SGQKS
286
SC
291
Mutation Information
DNA mutation:
None
Peptide Range:
245 ~ 269
Mut AA position:
257 (13 in Wild Type peptide)
Alignment
Wild Type:
"VPVSSCCAPTSSRQPSYCRQASCVS
||||||||||||.||||||||||||
Mutant:
VPVSSCCAPTSSCQPSYCRQASCVS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) KRTAP10-9

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay