Immunogenicity 14697
Sample ID
3784
Response
Negative
Tumor Type
Melanoma
Gene Symbol
PABPC5
Transcript ID
NM_080832
HLA INFO
A*01:01
TCR INFO
No TCR info found!
Full length protein sequence (382 aa)
MGSGE
1
PNPAG
6
KKKKY
11
LKAAL
16
YVGDL
21
DPDVT
26
EDMLY
31
KKFRP
36
AGPLR
41
FTRIC
46
RDPVT
51
RSPLG
56
YGYVN
61
FRFPA
66
DAEWA
71
LNTMN
76
FDLIN
81
GKPFR
86
LMWSQ
91
PDDRL
96
RKSGV
101
GNIFI
106
KNLDK
111
SIDNR
116
ALFYL
121
FSAFG
126
NILSC
131
KVVCD
136
DNGSK
141
GYAYV
146
HFDSL
151
AAANR
156
AIWHM
161
NGVRL
166
NNRQV
171
YVGRF
176
KFPEE
181
RAAEV
186
RTRDR
191
ATFTN
196
VFVKN
201
IGDDI
206
DDEKL
211
KELFC
216
EYGPT
221
ESVKV
226
IRDAS
231
GKSKG
236
FGFVR
241
YETHE
246
AAQKA
251
VLDLH
256
GKSID
261
GKVLY
266
VGRAQ
271
KKIER
276
LAELR
281
RRFER
286
LRLKE
291
KSRPP
296
GVPIY
301
IKNLD
306
ETIND
311
EKLKE
316
EFSSF
321
GSISR
326
AKVMM
331
EVGQG
336
KGFGV
341
VCFSS
346
FEEAT
351
KAVDE
356
MNGRI
361
VGSKP
366
LHVTL
371
GQARR
376
RC
381
Mutation Information
DNA mutation:
None
Peptide Range:
171 ~ 195
Mut AA position:
183 (13 in Wild Type peptide)
Alignment
Wild Type:
"NNRQVYVGRFKFPEERAAEVRTRDR
||||||||||||.||||||||||||
Mutant:
NNRQVYVGRFKFLEERAAEVRTRDR"
Nat Med, 2016
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patientsGene Name (from Reference) PABPC5
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
PBMCs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay