Immunogenicity 14944

summary
Sample ID
3903
Response
Negative
Tumor Type
Melanoma
Gene Symbol
LIG3
Transcript ID
uc010cth.1
HLA INFO
C*12:03
TCR INFO

No TCR info found!

T cell Tumor cell C*12:03
sequence
Full length protein sequence (546 aa)
MSKFR
1
GLRYM
6
SLAFK
11
IFFPQ
16
TLRAL
21
SRKEL
26
CLFRK
31
HHWRD
36
VRQFS
41
QWSET
46
DLLHG
51
HPLFL
56
RRKPV
61
LSFQG
66
SHLRS
71
RATYL
76
VFLPG
81
LHVGL
86
CSGPC
91
EMAEQ
96
RFCVD
101
YAKRG
106
TAGCK
111
KCKEK
116
IVKGV
121
CRIGK
126
VVPNP
131
FSESG
136
GDMKE
141
WYHIK
146
CMFEK
151
LERAR
156
ATTKK
161
IEDLT
166
ELEGW
171
EELED
176
NEKEQ
181
ITQHI
186
ADLSS
191
KAAGT
196
PKKKA
201
VVQAK
206
LTTTG
211
QVTSP
216
VKGAS
221
FVTST
226
NPRKF
231
SGFSA
236
KPNNS
241
GEAPS
246
SPTPK
251
RSLSS
256
SKCDP
261
RHKDC
266
LLREF
271
RKLCA
276
MVADN
281
PSYNT
286
KTQII
291
QDFLR
296
KGSAG
301
DGFHG
306
DVYLT
311
VKLLL
316
PGVIK
321
TVYNL
326
NDKQI
331
VKLFS
336
RIFNC
341
NPDDM
346
ARDLE
351
QGDVS
356
ETIRV
361
FFEQS
366
KSFPP
371
AAKSL
376
LTIQE
381
VDEFL
386
LRLSK
391
LTKED
396
EQQQA
401
LQDIA
406
SRCTA
411
NDLKC
416
IIRLI
421
KHDLK
426
MNSGA
431
KHVLD
436
ALDPN
441
AYEAF
446
KASRN
451
LQDVV
456
ERVLH
461
NAQEV
466
EKEPG
471
QRRAL
476
SVQAS
481
LMTPV
486
QPMLA
491
EACKS
496
VEYAM
501
KKCPN
506
GMFSE
511
IKYDG
516
ERVQV
521
HKNGD
526
HFSYF
531
SRSLK
536
PVLPH
541
K
546
Mutation Information
DNA mutation:
None
Peptide Range:
461 ~ 485
Mut AA position:
None (None in Wild Type peptide)
Alignment
Wild Type:
"ERVLHNAQEVEKEPGQRRALSVQAS
||||||||||||.||||||||||||
Mutant:
ERVLHNAQEVEKKPGQRRALSVQAS"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

PBMCs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay