Immunogenicity 15325

Sample ID
4095
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
CPEB3 (FPKM: 0.42)
Transcript ID
ENST00000265997

HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
Full length protein sequence (698 aa)
MQDDL
1
LMDKS
6
KTQPQ
11
PQQQQ
16
RQQQQ
21
PQPES
26
SVSEA
31
PSTPL
36
SSETP
41
KPEEN
46
SAVPA
51
LSPAA
56
APPAP
61
NGPDK
66
MQMES
71
PLLPG
76
LSFHQ
81
PPQQP
86
PPPQE
91
PAAPG
96
ASLSP
101
SFGST
106
WSTGT
111
TNAVE
116
DSFFQ
121
GITPV
126
NGTML
131
FQNFP
136
HHVNP
141
VFGGT
146
FSPQI
151
GLAQT
156
QHHQQ
161
PPPPA
166
PAPQP
171
AQPAQ
176
PPQAQ
181
PPQQR
186
RSPAS
191
PSQAP
196
YAQRS
201
AAAAY
206
GHQPI
211
MTSKP
216
SSSSA
221
VAAAA
226
AAAAA
231
SSASS
236
SWNTH
241
QSVNA
246
AWSAP
251
SNPWG
256
GLQAG
261
RDPRR
266
AVGVG
271
VGVGV
276
GVPSP
281
LNPIS
286
PLKKP
291
FSSNV
296
IAPPK
301
FPRAA
306
PLTSK
311
SWMED
316
NAFRT
321
DNGNN
326
LLPFQ
331
DRSRP
336
YDTFN
341
LHSLE
346
NSLMD
351
MIRTD
356
HEPLK
361
GKHYP
366
PSGPP
371
MSFAD
376
IMWRN
381
HFAGR
386
MGINF
391
HHPGT
396
DNIMA
401
LNNAF
406
LDDSH
411
GDQAL
416
SSGLS
421
SPTRC
426
QNGER
431
VERYS
436
RKVFV
441
GGLPP
446
DIDED
451
EITAS
456
FRRFG
461
PLVVD
466
WPHKA
471
ESKSY
476
FPPKG
481
YAFLL
486
FQEES
491
SVQAL
496
IDACL
501
EEDGK
506
LYLCV
511
SSPTI
516
KDKPV
521
QIRPW
526
NLSDS
531
DFVMD
536
GSQPL
541
DPRKT
546
IFVGG
551
VPRPL
556
RAVEL
561
AMIMD
566
RLYGG
571
VCYAG
576
IDTDP
581
ELKYP
586
KGAGR
591
VAFSN
596
QQSYI
601
AAISA
606
RFVQL
611
QHNDI
616
DKRVE
621
VKPYV
626
LDDQM
631
CDECQ
636
GTRCG
641
GKFAP
646
FFCAN
651
VTCLQ
656
YYCEY
661
CWASI
666
HSRAG
671
REFHK
676
PLVKE
681
GGDRP
686
RHVPF
691
RWS
696
Mutation Information
DNA mutation:
c.G1673T
Peptide Range:
546 ~ 570
Mut AA position:
558 (13 in Wild Type peptide)
Alignment
Wild Type:
"DPRKTIFVGGVPRPLRAVELAMIMD
||||||||||||.||||||||||||
Mutant:
DPRKTIFVGGVPLPLRAVELAMIMD"

N Engl J Med, 2016

T-Cell Transfer Therapy Targeting Mutant KRAS in Cancer

Gene Name (from Reference) CPEB3

Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

DCs

Assay

IFNg ELISPOT assay