Immunogenicity 1590

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SPAG11A
Transcript ID
ENST00000454911
HLA INFO
DQA*01:02 / DQB*06:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:02
sequence
Full length protein sequence (50 aa)
MKVFF
1
LFAVL
6
FCLVQ
11
TNSVH
16
ISHQE
21
ARGPS
26
FKICV
31
GFLGP
36
RWARG
41
CSTGN
46
Mutation Information
DNA mutation:
None
Peptide Range:
12 ~ 36
Mut AA position:
24 (13 in Wild Type peptide)
Alignment
Wild Type:
"CLVQTNSVHISHQEARGPSFKICVG
||||||||||||.||||||||||||
Mutant:
CLVQTNSVHISHREARGPSFKICVG"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000178287

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay