Immunogenicity 1671

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
POU1F1
Transcript ID
ENST00000560656
HLA INFO
B*44:03
TCR INFO

No TCR info found!

T cell Tumor cell B*44:03
sequence
Full length protein sequence (169 aa)
MSCQA
1
FTSAD
6
TFIPL
11
NSDAS
16
ATLPL
21
IMHHS
26
AAECL
31
PVSNH
36
ATNVM
41
STATG
46
LHYSV
51
PSCHY
56
GNQPS
61
TYGVM
66
AGSLT
71
PCLYK
76
FPDHT
81
LSHGF
86
PPIHQ
91
PLLAE
96
DPTAA
101
DFKQE
106
LRRKS
111
KLVEE
116
PIDMD
121
SPEIR
126
ELEKF
131
ANEFK
136
VRRIK
141
LALLL
146
KMLWR
151
DTLEN
156
RINLL
161
LKRS
166
Mutation Information
DNA mutation:
None
Peptide Range:
124 ~ 148
Mut AA position:
136 (13 in Wild Type peptide)
Alignment
Wild Type:
"MDSPEIRELEKFANEFKVRRIKLAL
||||||||||||.||||||||||||
Mutant:
MDSPEIRELEKFGNEFKVRRIKLAL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000064835

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay