Immunogenicity 1682

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
KRTAP4-8
Transcript ID
ENST00000333822
HLA INFO
DRB*13:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*13:01
sequence
Full length protein sequence (185 aa)
MVNSC
1
CGSVC
6
SDQGC
11
GQDLC
16
QETCC
21
CPSCC
26
QTTCC
31
RTTCY
36
RPSYS
41
VSCCC
46
RPQCC
51
QSVCC
56
QPTCC
61
RPSCC
66
VSSCC
71
KPQCC
76
QSVCC
81
QPTCC
86
HPSCC
91
ISSCC
96
RPSCC
101
VSSCC
106
KPQCC
111
QSVCC
116
QPNCC
121
RPSCS
126
ISSCC
131
RPSCC
136
ESSCC
141
RPCCC
146
LRPVC
151
GRVSC
156
HTTCY
161
RPACV
166
ISTCP
171
RPVCC
176
ASSCC
181
Mutation Information
DNA mutation:
None
Peptide Range:
79 ~ 103
Mut AA position:
91 (13 in Wild Type peptide)
Alignment
Wild Type:
"CCQSVCCQPTCCHPSCCISSCCRPS
||||||||||||.||||||||||||
Mutant:
CCQSVCCQPTCCRPSCCISSCCRPS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) KRTAP4-8

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay