Immunogenicity 1712

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
KRTAP9-9
Transcript ID
ENST00000394008
HLA INFO
DQA*05:01 / DQB*06:03
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*05:01 DQB*06:03
sequence
Full length protein sequence (169 aa)
MTHCC
1
SPCCQ
6
PTCCR
11
TTCWK
16
PTTVT
21
TCSST
26
PCCQP
31
SCCVS
36
SCCQP
41
CCRPA
46
CCQNT
51
CCRTT
56
CCQPT
61
CLTSC
66
CQPSC
71
CSTTC
76
CQPIC
81
CGSSC
86
CGQTS
91
CGSSC
96
GQSSS
101
CAPVY
106
CRRTC
111
YYPTT
116
VCLPG
121
CLNQS
126
CGSSC
131
CQPCC
136
RPACC
141
ETTCC
146
RTTCF
151
QPTCV
156
SSCCQ
161
PSCC
166
Mutation Information
DNA mutation:
None
Peptide Range:
105 ~ 129
Mut AA position:
117 (13 in Wild Type peptide)
Alignment
Wild Type:
"SCAPVYCRRTCYYPTTVCLPGCLNQ
||||||||||||.||||||||||||
Mutant:
SCAPVYCRRTCYHPTTVCLPGCLNQ"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) KRTAP9-9

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay